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PLM3_127_b2_sep16_scaffold_41695_4

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(2003..3136)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Selenomonas sp. F0473 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 362.0
  • Bit_score: 422
  • Evalue 3.00e-115
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 332.0
  • Bit_score: 240
  • Evalue 7.80e-61
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 362.0
  • Bit_score: 422
  • Evalue 4.20e-115

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1134
GTGACTCCCCGCGAGACAACAGGGAAAGTTGCCGACCTGCCACAATCCGGCAGCTTCGCGCAGCGGCTGGCTGGCGCGCTCTCCGCCGCGACGGCGCGGGGCCACATCACCCCCCACGACTACGAGGCGTTGCTCGCCGATCCCGAGTTCGTGGCGGAGGCGTTCGAGGAGTTTACGATCGCCGCCGCATCGTCGGGCGTGCGGCTGCCCGACGAGACGAGTGTGGACGAGGTGGGAGGGAGCGACCCGGAGCGACCCGAACTCCCCTGGTTCCCCCAGCTCCATGAGCACTGGGCGGACCTGGACCTGGTCGACATCTATCTCGGCGAGATCGGCCGTATCCCGCTGCTCAGCCACACGGAACTGCTCGCGACGGCGGAGCGAGCGCGCGACGGCGATGAGGAGGCGCGCAAGCGAATCATCATGGCCAACCTGCGCCTCGTGGTGCATGTGGCGCGTGGTTACCGGAACCGGGGGCTCCCATTGCTCGACTTGATCGAGGAGGGGAACCTGGGCCTCATCCGCGCGGCGGACCGATTCGAGCCCGAACGCGGGCTGCGCTTCAGCACGTACGCGACCATCTGGATCCGCCAGGCGATCCTGCGCGGCATCGCCGAGCAGGCGAAATCGCTGCGCATCCCGGTCCAGATGTTCCAGCAGATGAACCGGTTCGCCCGGGCCGAACGCGCCCTGCGCGGACGGCTGGGCCGCGACCCCGACGTCGGCGAGGTCGCGGGCGAGCTGGGCATCTCGCTCCCTCGCGCCGAGCGCCTGTCGGCGCTCATCGTCGGGTTGCGCTCGCTCGACGAGGGCTCGAGCCTGGCCGCCTTCGAGCAACTGACCGCCGAGGATCTCGGCGAGGCGCCGCTCTCGGTCGAGCGTCTGGTCGAGCTCCAGCTCGAGCACGAGCAGCTCGACCAGCTGCTCCGCTCGCTCAGCCAGCGCGAGGAGCAGATCTTGCGCATCCGGTACGGATTTCAAGACGGGGTCGCCCGCACGCTCGCTCAGACGGGCCAGCTGTTCGGCATCTCGCGCGAGCGCGTCCGGCAGATCGAGGCGCGGGCGCTCGGGAAGCTGCGCCGGGCGATGGAGCTGCACGAAATGGATGGTGCCGGGAACACGTCGATCCACTAG
PROTEIN sequence
Length: 378
VTPRETTGKVADLPQSGSFAQRLAGALSAATARGHITPHDYEALLADPEFVAEAFEEFTIAAASSGVRLPDETSVDEVGGSDPERPELPWFPQLHEHWADLDLVDIYLGEIGRIPLLSHTELLATAERARDGDEEARKRIIMANLRLVVHVARGYRNRGLPLLDLIEEGNLGLIRAADRFEPERGLRFSTYATIWIRQAILRGIAEQAKSLRIPVQMFQQMNRFARAERALRGRLGRDPDVGEVAGELGISLPRAERLSALIVGLRSLDEGSSLAAFEQLTAEDLGEAPLSVERLVELQLEHEQLDQLLRSLSQREEQILRIRYGFQDGVARTLAQTGQLFGISRERVRQIEARALGKLRRAMELHEMDGAGNTSIH*