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PLM3_127_b2_sep16_scaffold_41695

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_41695_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..399)
DNA (399bp) protein (133aa)
Proline dehydrogenase Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
proline dehydrogenase
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_127_b2_sep16_scaffold_41695_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1198..1413
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Arthrobacter sp. SJCon RepID=L8TQP1_9MICC bin=16ft_combo_ws3_JS1 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_41695_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1424..1951)
DNA (528bp) protein (176aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
adenine phosphoribosyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_41695_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2003..3136)
DNA (1134bp) protein (378aa)
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Selenomonas sp. F0473 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RNA polymerase, sigma 70 subunit, RpoD
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_41695_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3146..3421)
DNA (276bp) protein (92aa)
acylphosphatase (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
acylphosphatase-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_127_b2_sep16_scaffold_41695_6
unknown

Not on your lists

comp(3744..4559)
DNA (816bp) protein (272aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_41695_7
unknown

Not on your lists

4641..5309
DNA (669bp) protein (223aa)
id=24426368 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM3_127_b2_sep16_scaffold_41695_8
unknown

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5309..5755
DNA (447bp) protein (149aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_41695_9
unknown

Not on your lists

5919..6035
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_41695_10
unknown

Not on your lists

6117..6497
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_41695_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6638..6817
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_127_b2_sep16_scaffold_41695_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6792..7172
DNA (381bp) protein (127aa)
UPI0003CE9783 related cluster Tax=unknown RepID=UPI0003CE9783
peptidase S14 ClpP
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_127_b2_sep16_scaffold_41695_13
unknown

Not on your lists

comp(7345..7662)
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 13 items

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