ggKbase home page

PLM3_127_b2_sep16_scaffold_46310_2

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: 397..819

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RL16_HALOH bin=16ft_combo_ws3_JS1 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 140.0
  • Bit_score: 253
  • Evalue 6.80e-65
rplP; 50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 140.0
  • Bit_score: 220
  • Evalue 1.80e-55
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 140.0
  • Bit_score: 253
  • Evalue 9.60e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 423
ATGTTGATGCCCAAGCGGGTCAAGTACCGCAAGCAGATGCGCGGCCGCATGTGCGGCAAGGCCTACCGCGGCTCGTCGGTGGCGTTCGGCGAGTTCGGGCTGATGGCACTCGAGCCGGCTTGGGTGACCAACCGCCAGATCGAAGCCGCCCGTGTCGCGATCACGCGCGCGCTCAAGCGCGGAGGCAAGATGTGGATCCGGATCTTCCCGGACAAGCCGGTCACGAAGAAGCCGGCCGAGACCCGGATGGGCAAGGGCAAGGGCGCTCCCGAGGGCTGGGTCGCGGTGATCAAGCCCGGGCGCGTGATGTTCGAGCTCGAAGGCATCTCGAAGAAGCTCGCGCAGGACGCCATGACGCTCGGGGCGTCCAAGCTGCCGATCCGCACGCGGTTCGTCGAGCGTCACGCGCTGGGAGGGGAGTGA
PROTEIN sequence
Length: 141
MLMPKRVKYRKQMRGRMCGKAYRGSSVAFGEFGLMALEPAWVTNRQIEAARVAITRALKRGGKMWIRIFPDKPVTKKPAETRMGKGKGAPEGWVAVIKPGRVMFELEGISKKLAQDAMTLGASKLPIRTRFVERHALGGE*