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PLM3_127_b2_sep16_scaffold_8585

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_8585_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2..262)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIK3_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8585_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(660..1691)
DNA (1032bp) protein (344aa)
Chaperone protein DnaJ Tax=Candidatus Nitrospira defluvii RepID=D8PIK1_9BACT
cbpA; curved DNA-binding protein CbpA
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_8585_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1728..2627)
DNA (900bp) protein (300aa)
Putative PP-loop ATPase, YdaO type Tax=Candidatus Nitrospira defluvii RepID=D8PIJ5_9BACT
putative P-loop ATPase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_127_b2_sep16_scaffold_8585_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2719..2934)
DNA (216bp) protein (72aa)
Putative Thiamine biosynthesis protein ThiS Tax=Candidatus Nitrospira defluvii RepID=D8PIJ4_9BACT
putative thiamine biosynthesis protein ThiS
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8585_5
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3006..4394)
DNA (1389bp) protein (463aa)
Polynucleotide adenylyltransferase region Tax=Coraliomargarita sp. CAG:312 RepID=R7L998_9BACT
polynucleotide adenylyltransferase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
PLM3_127_b2_sep16_scaffold_8585_6
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4592..5404)
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YBC0_THIV6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL74288.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
PLM3_127_b2_sep16_scaffold_8585_7
unknown

Not on your lists

5437..5859
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8585_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5853..6437)
DNA (585bp) protein (195aa)
transmembrane_regions bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_8585_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6657..7661)
DNA (1005bp) protein (335aa)
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PIJ2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_127_b2_sep16_scaffold_8585_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(7800..8237)
DNA (438bp) protein (146aa)
Glycoside hydrolase, family 57 Tax=Candidatus Nitrospira defluvii RepID=D8PIJ1_9BACT
glycoside hydrolase family 57 protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8585_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8284..9864)
DNA (1581bp) protein (527aa)
Glycoside hydrolase, family 57 Tax=Candidatus Nitrospira defluvii RepID=D8PIJ1_9BACT
glycoside hydrolase family 57 protein
Glycoside hydrolase, family 57 {ECO:0000313|EMBL:CBK43078.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_127_b2_sep16_scaffold_8585_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

10225..10626
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIJ0_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_127_b2_sep16_scaffold_8585_13
unknown

Not on your lists

10623..10811
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_8585_14
unknown

Not on your lists

10918..11208
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying 14 items

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