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PLM3_127_b2_sep16_scaffold_5528

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5528_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3..1109)
DNA (1107bp) protein (369aa)
Putative S16B family peptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
peptidase M16 domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_5528_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1116..3206)
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_5528_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(3390..3650)
DNA (261bp) protein (87aa)
30S ribosomal protein S15 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y2_GEMAT
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_5528_4
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3755..4909)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036E60FC
Uncharacterized protein {ECO:0000313|EMBL:KEQ27801.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_5528_5

Not on your lists

4918..5493
DNA (576bp) protein (192aa)
Marine sediment metagenome DNA, contig: S06H3_S16432 {ECO:0000313|EMBL:GAI33138.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWA2_Planctomycetia_40_7 species=Aeromonas hydrophila genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
PLM3_127_b2_sep16_scaffold_5528_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(5566..6798)
DNA (1233bp) protein (411aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] bin=bin7_NC10_sister species=Mucispirillum schaedleri genus=Mucispirillum taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
zinc metallopeptidase RseP
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_5528_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6798..7901)
DNA (1104bp) protein (368aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y7_GEMAT
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_5528_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8000..8866)
DNA (867bp) protein (289aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y8_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_5528_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8866..9606)
DNA (741bp) protein (247aa)
Isoprenyl transferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y9_GEMAT
Undecaprenyl pyrophosphate synthase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_5528_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9611..10165)
DNA (555bp) protein (185aa)
Ribosome-recycling factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z0_GEMAT
frr; ribosome recycling factor
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_5528_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10162..10872)
DNA (711bp) protein (237aa)
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z1_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_5528_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10872..11477)
DNA (606bp) protein (202aa)
Elongation factor Ts Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=EFTS_DESOH
translation elongation factor Ts
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_5528_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(11575..12474)
DNA (900bp) protein (300aa)
30S ribosomal protein S2 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
ribosomal protein S2
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_5528_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(12670..13071)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_5528_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(13068..13520)
DNA (453bp) protein (151aa)
50S ribosomal protein L13 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_5528_16
unknown

Not on your lists

comp(13987..14094)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 16 items

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