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PLM3_127_b2_sep16_scaffold_2132

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2132_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2..274)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_2132_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(274..621)
DNA (348bp) protein (116aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_2132_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(618..1466)
DNA (849bp) protein (283aa)
Uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tfp pilus assembly protein PilF
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_2132_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1459..2502)
DNA (1044bp) protein (348aa)
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_2132_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2506..5262)
DNA (2757bp) protein (919aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A890_GEMAT
Tetratricopeptide TPR_2 repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_2132_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5266..5886)
DNA (621bp) protein (207aa)
Chemotaxis protein CheC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A889_GEMAT
CheC domain protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_2132_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5896..7782)
DNA (1887bp) protein (629aa)
cheA; chemotaxis protein CheA (EC:2.7.13.3)
Chemotaxis protein CheA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A888_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_2132_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7786..8148)
DNA (363bp) protein (121aa)
Chemotaxis protein CheY homolog Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A887_GEMAT
chemotaxis protein CheY homolog
Chemotaxis protein CheY homolog {ECO:0000313|EMBL:BAH38447.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3_127_b2_sep16_scaffold_2132_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8186..8620)
DNA (435bp) protein (145aa)
Chemotaxis signal transduction protein CheW Tax=Melioribacter roseus (strain P3M) RepID=I6YY18_MELRP
Chemotaxis signal transduction protein CheW
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_2132_10
unknown

Not on your lists

8907..9776
DNA (870bp) protein (290aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_2132_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9691..10266)
DNA (576bp) protein (192aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A883_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_2132_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10250..10633)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A882_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_2132_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10633..13821)
DNA (3189bp) protein (1063aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A881_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 13 items

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