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PLM3_127_b2_sep16_scaffold_3390

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3390_1

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1..648
DNA (648bp) protein (216aa)
Transcriptional repressor DcmR Tax=Rhizobiales RepID=DCMR_METED
Transcriptional repressor of DCM dehalogenase {ECO:0000313|EMBL:AHN97947.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
excisionase family DNA binding domain-containing protein
PLM3_127_b2_sep16_scaffold_3390_2
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

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645..1073
DNA (429bp) protein (143aa)
UPI0003CF6408 related cluster Tax=unknown RepID=UPI0003CF6408
Uncharacterized protein {ECO:0000313|EMBL:KFF47542.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
PLM3_127_b2_sep16_scaffold_3390_3
unknown

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comp(1495..2379)
DNA (885bp) protein (295aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3390_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2540..3079
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM0_GEMAT
DinB-like domain protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_3390_5
unknown

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3165..3479
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3390_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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3505..3642
DNA (138bp) protein (46aa)
nucleotide-diphosphate-sugar epimerase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036FDF49
nucleotide-diphosphate-sugar epimerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_127_b2_sep16_scaffold_3390_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3668..3970
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CH22_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI64939.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM3_127_b2_sep16_scaffold_3390_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4216..5985)
DNA (1770bp) protein (590aa)
Putative glucosamine-6-phosphate isomerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_3390_9
unknown

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6323..6778
DNA (456bp) protein (152aa)
PLM3_127_b2_sep16_scaffold_3390_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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6775..7209
DNA (435bp) protein (145aa)
GCN5-related N-acetyltransferase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUE9_HERA2
N-acetyltransferase GCN5
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_127_b2_sep16_scaffold_3390_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7206..7670
DNA (465bp) protein (155aa)
Membrane protein-like protein bin=GWA2_Elusimicrobia_69_24 species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_3390_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7689..8120
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_127_b2_sep16_scaffold_3390_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8206..8508
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9P3B7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX57626.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3390_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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8610..8963
DNA (354bp) protein (118aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_127_b2_sep16_scaffold_3390_15
unknown

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8993..9169
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3390_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9178..9819
DNA (642bp) protein (214aa)
Putative uncharacterized protein Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PVG6_CLOSD
Protein of unknown function DUF4230
Uncharacterized protein {ECO:0000313|EMBL:AHG92540.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3390_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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9853..11184
DNA (1332bp) protein (444aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-); K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin7_NC10_sister organism_group=NC10
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-)
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_3390_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11276..11545
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_3390_19
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11579..12058
DNA (480bp) protein (160aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003669087
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
PLM3_127_b2_sep16_scaffold_3390_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12072..12581
DNA (510bp) protein (170aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT11_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88851.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3390_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12590..13087
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Flavobacterium sp. F52 RepID=J0S5T8_9FLAO
protein of unknown function DUF664
Uncharacterized protein {ECO:0000313|EMBL:AHG93073.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3390_22
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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13084..13521
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UN09_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR35364.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_3390_23
unknown

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13553..13774
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3390_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13807..14904
DNA (1098bp) protein (366aa)
Glycogen debranching enzyme bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycogen debranching enzyme GlgX
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_3390_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14876..15841
DNA (966bp) protein (322aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glycogen debranching enzyme GlgX Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UEI0_CELFN
glycogen debranching enzyme GlgX
PLM3_127_b2_sep16_scaffold_3390_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(15849..16226)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000375E633
two-component response regulator
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_3390_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16398..17159
DNA (762bp) protein (254aa)
Prephenate dehydrogenase Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z751_9GAMM
prephenate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_3390_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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17156..17824
DNA (669bp) protein (223aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Rhodanobacter denitrificans RepID=M4NDF4_9GAMM
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 28 items

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