ggKbase home page

PLM3_127_b2_sep16_scaffold_3857

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_3857_1
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

1..618
DNA (618bp) protein (206aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260.;"
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase Tax=Aminomonas paucivorans DSM 12260 RepID=E3CWH9_9BACT
PLM3_127_b2_sep16_scaffold_3857_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(735..1604)
DNA (870bp) protein (290aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_3857_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1893..3386)
DNA (1494bp) protein (498aa)
Aldehyde dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_3857_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3442..3906)
DNA (465bp) protein (155aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38209.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3_127_b2_sep16_scaffold_3857_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3903..5267)
DNA (1365bp) protein (455aa)
Putative NtrC family two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
putative NtrC family two-component response regulator
Putative NtrC family two-component response regulator {ECO:0000313|EMBL:BAH38208.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3_127_b2_sep16_scaffold_3857_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5264..5908)
DNA (645bp) protein (215aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_3857_7
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5908..6462)
DNA (555bp) protein (185aa)
2'-5' RNA ligase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGJ3_ANASK
2'-5' RNA ligase
Tax=CG_Anaero_03
PLM3_127_b2_sep16_scaffold_3857_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6462..7271)
DNA (810bp) protein (270aa)
Putative uncharacterized protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACL9_CARHZ
Conserved hypothetical protein CHP00268
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_3857_9
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7527..7781
DNA (255bp) protein (85aa)
Class I peptide chain release factor Tax=Desulfovibrio sp. X2 RepID=S7TPU3_9DELT
Class I peptide chain release factor {ECO:0000313|EMBL:EPR38685.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
Class I peptide chain release factor
PLM3_127_b2_sep16_scaffold_3857_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7872..8576
DNA (705bp) protein (235aa)
hypothetical protein bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_3857_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8577..10259)
DNA (1683bp) protein (561aa)
diguanylate cyclase bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
Tax=CSP1_5_NC10
PLM3_127_b2_sep16_scaffold_3857_12
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(10522..12060)
DNA (1539bp) protein (513aa)
Competence ATPase ComM Tax=Geobacter sulfurreducens RepID=D7AF41_GEOSK
comM; competence ATPase ComM
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM3_127_b2_sep16_scaffold_3857_13
unknown

Not on your lists

12245..12700
DNA (456bp) protein (152aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3857_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12839..14407
DNA (1569bp) protein (523aa)
Carboxyl-terminal processing protease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_3857_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14409..17288)
DNA (2880bp) protein (960aa)
Putative two-component histidine kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_127_b2_sep16_scaffold_3857_16
unknown

Not on your lists

17902..18297
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_3857_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18367..18990
DNA (624bp) protein (208aa)
Creatininase Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRU4_CLOPH
Creatininase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 17 items

View Taxonomy