ggKbase home page

PLM3_127_b2_sep16_scaffold_26146

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_26146_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

161..1189
DNA (1029bp) protein (343aa)
Streptogramin lyase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK50_RHOMR
streptogramin lyase
Streptogramin lyase {ECO:0000313|EMBL:AEN72806.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM3_127_b2_sep16_scaffold_26146_2
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1370..1516
DNA (147bp) protein (49aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3_127_b2_sep16_scaffold_26146_3

Not on your lists

1503..1856
DNA (354bp) protein (118aa)
Marine sediment metagenome DNA, contig: S06H3_L01479 {ECO:0000313|EMBL:GAI04934.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM3_127_b2_sep16_scaffold_26146_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1881..3464
DNA (1584bp) protein (528aa)
Na+/H+ antiporter Tax=Cystobacter fuscus DSM 2262 RepID=S9QJD0_9DELT
Na+/H+ antiporter {ECO:0000313|EMBL:EPX56563.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
sodium/hydrogen exchanger
PLM3_127_b2_sep16_scaffold_26146_5
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3584..4048
DNA (465bp) protein (155aa)
Transcriptional regulator, MarR family Tax=Gloeocapsa sp. PCC 7428 RepID=K9XHD3_9CHRO
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AFZ31928.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
PLM3_127_b2_sep16_scaffold_26146_6
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4429..4566
DNA (138bp) protein (46aa)
Tax=RBG_16_Gammaproteobacteria_51_14_curated
Displaying 6 items

View Taxonomy