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PLM3_127_b2_sep16_scaffold_6534

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6534_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..1198)
DNA (1197bp) protein (399aa)
Putative iron-sulfur cluster assembly protein SufB Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC42_GEMAT
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AHG89627.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_127_b2_sep16_scaffold_6534_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(1195..1908)
DNA (714bp) protein (238aa)
Putative transcriptional regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC41_GEMAT
putative transcriptional regulator
Tax=RBG_16_Acidobacteria_68_9_curated
PLM3_127_b2_sep16_scaffold_6534_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2182..2742
DNA (561bp) protein (187aa)
Peptide deformylase bin=GWC2_Ignavibacteria_56_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptide deformylase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_6534_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2812..4854)
DNA (2043bp) protein (681aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3R1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37138.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3_127_b2_sep16_scaffold_6534_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4963..5226
DNA (264bp) protein (88aa)
Ferredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin
Ferredoxin {ECO:0000313|EMBL:BAH40064.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3_127_b2_sep16_scaffold_6534_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5510..6718)
DNA (1209bp) protein (403aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24)
Putative 3-oxoadipate enol-lactonase Tax=Candidatus Nitrospira defluvii RepID=D8PJ01_9BACT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_6534_7
unknown

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6729..7028
DNA (300bp) protein (100aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6534_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7371..8129
DNA (759bp) protein (253aa)
Putative ribonuclease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_127_b2_sep16_scaffold_6534_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8158..9615)
DNA (1458bp) protein (486aa)
Beta-lactamase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH34_RHOM4
beta-lactamase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_6534_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9624..10442)
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_6534_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10591..13371)
DNA (2781bp) protein (927aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:BAH37052.1}; EC=2.7.7.7 {ECO:0000313|EMBL:BAH37052.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
DNA polymerase I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
PLM3_127_b2_sep16_scaffold_6534_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13617..14966)
DNA (1350bp) protein (450aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_6534_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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15104..16003
DNA (900bp) protein (300aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_6534_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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16061..16501
DNA (441bp) protein (147aa)
Orotate phosphoribosyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
Orotate phosphoribosyltransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3_127_b2_sep16_scaffold_6534_15
unknown

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16549..16773
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6534_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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16770..17072
DNA (303bp) protein (101aa)
Putative thiol-disulphide oxidoreductase DCC Tax=Pedosphaera parvula Ellin514 RepID=B9XGN8_9BACT
Putative thiol-disulphide oxidoreductase DCC {ECO:0000313|EMBL:EEF61089.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 16 items

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