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PLM3_127_b2_sep16_scaffold_10408

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10408_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3..320
DNA (318bp) protein (106aa)
nth; endonuclease III (EC:4.2.99.18) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
nth; endonuclease III (EC:4.2.99.18)
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_10408_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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417..863
DNA (447bp) protein (149aa)
50S ribosomal protein L13 bin=GWC2_Methylomirabilis_70_16 species=Eubacterium plexicaudatum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L13
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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887..1282
DNA (396bp) protein (132aa)
30S ribosomal protein S9 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
30S ribosomal protein S9
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1297..2337
DNA (1041bp) protein (347aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2345..4396
DNA (2052bp) protein (684aa)
Arginine biosynthesis bifunctional protein ArgJ bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
30S ribosomal protein S2
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4411..5013
DNA (603bp) protein (201aa)
Elongation factor Ts bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tsf; translation elongation factor Ts
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5019..5768
DNA (750bp) protein (250aa)
Uridylate kinase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pyrH; uridylate kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_10408_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5773..6327
DNA (555bp) protein (185aa)
Ribosome-recycling factor bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
frr; ribosome recycling factor
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6466..7248
DNA (783bp) protein (261aa)
Isoprenyl transferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UDP pyrophosphate synthase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10408_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7248..8117
DNA (870bp) protein (290aa)
Phosphatidate cytidylyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphatidate cytidylyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_10408_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8105..8563
DNA (459bp) protein (153aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase bin=GWF2_Methylomirabilis_70_14 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 11 items

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