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PLM3_127_b2_sep16_scaffold_10652

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10652_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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27..695
DNA (669bp) protein (223aa)
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_10652_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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707..1384
DNA (678bp) protein (226aa)
Tetratricopeptide TPR_2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_10652_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1428..2123
DNA (696bp) protein (232aa)
Probable transferase protein bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative transferase protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10652_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2143..4146)
DNA (2004bp) protein (668aa)
hypothetical protein Tax=Variovorax paradoxus RepID=UPI00036BBE84
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_10652_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4168..5364)
DNA (1197bp) protein (399aa)
Transporter, major facilitator family protein Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUG5_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM03349.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
arabinose ABC transporter permease
PLM3_127_b2_sep16_scaffold_10652_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5426..6322)
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_10652_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6333..6839
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10652_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6850..7008
DNA (159bp) protein (53aa)
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_10652_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7106..8320
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10652_10
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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8289..8882
DNA (594bp) protein (198aa)
leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Leucyl/phenylalanyl-tRNA--protein transferase Tax=Chthonomonas calidirosea T49 RepID=S0EZM5_9BACT
PLM3_127_b2_sep16_scaffold_10652_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8879..9571)
DNA (693bp) protein (231aa)
Putative Tartrate dehydratase beta subunit bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
class I fumarate hydratase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_10652_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(9568..11871)
DNA (2304bp) protein (768aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cimA; alpha-isopropylmalate/homocitrate synthase family transferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_10652_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12342..13031
DNA (690bp) protein (230aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Leucine--tRNA ligase Tax=Sorangium cellulosum So0157-2 RepID=S4XJX9_SORCE
leucyl-tRNA synthetase
Displaying 13 items

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