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PLM3_127_b2_sep16_scaffold_10820

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_10820_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3..788
DNA (786bp) protein (262aa)
COGs COG0726 Tax=Nitrosospira sp. APG3 RepID=M5DK79_9PROT
polysaccharide deacetylase
COGs COG0726 {ECO:0000313|EMBL:CCU63871.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
PLM3_127_b2_sep16_scaffold_10820_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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804..2300
DNA (1497bp) protein (499aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamine amidotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_10820_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2332..2619
DNA (288bp) protein (96aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glucosamine--fructose-6-phosphate aminotransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_10820_4
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2663..4021
DNA (1359bp) protein (453aa)
Wzy family polymerase, exosortase system type 1 associated Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6U0_NITWC
wzy family polymerase
Wzy family polymerase, exosortase system type 1 associated {ECO:0000313|EMBL:ADJ28617.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3_127_b2_sep16_scaffold_10820_5
GWA1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

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4014..4796
DNA (783bp) protein (261aa)
ABC-2 type transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XL6_SOLUE
ABC-2 type transporter {ECO:0000313|EMBL:KKS83251.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_43_11.;"
ABC-2 type transporter
PLM3_127_b2_sep16_scaffold_10820_6
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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4813..6045
DNA (1233bp) protein (411aa)
ABC transporter related Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZX4_HERA2
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABX03681.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_127_b2_sep16_scaffold_10820_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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6059..7864
DNA (1806bp) protein (602aa)
Asparagine synthetase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLR4_SINAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_127_b2_sep16_scaffold_10820_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7867..9759
DNA (1893bp) protein (631aa)
Asparagine synthetase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLR4_SINAD
asparagine synthase
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:AGA29611.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_127_b2_sep16_scaffold_10820_9
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9978..11162
DNA (1185bp) protein (395aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
Multi-sensor signal transduction histidine kinase Tax=uncultured bacterium RepID=K1YRU6_9BACT
periplasmic sensor signal transduction histidine kinase
PLM3_127_b2_sep16_scaffold_10820_10
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11156..11734
DNA (579bp) protein (193aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Sensor histidine kinase, GAF domain-containing Tax=Geobacter metallireducens RepID=Q39U52_GEOMG
sensor histidine kinase, GAF domain-containing
PLM3_127_b2_sep16_scaffold_10820_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11731..12012
DNA (282bp) protein (94aa)
Eight transmembrane protein EpsH bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
eight transmembrane protein EpsH
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 11 items

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