ggKbase home page

PLM3_127_b2_sep16_scaffold_28354

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_28354_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1..714
DNA (714bp) protein (238aa)
ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_28354_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

775..1506
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_28354_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1521..1988
DNA (468bp) protein (156aa)
ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_28354_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1946..2227
DNA (282bp) protein (94aa)
ABC transporter ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_28354_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2327..3193
DNA (867bp) protein (289aa)
ABC transporter permease bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_28354_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3199..4194
DNA (996bp) protein (332aa)
ABC transporter permease bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_28354_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4228..5136
DNA (909bp) protein (303aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_28354_8
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5148..5447
DNA (300bp) protein (100aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium; Yellowstone B-Prime).;"
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JHX8_SYNJB
PLM3_127_b2_sep16_scaffold_28354_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5444..6142
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_28354_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6162..7193
DNA (1032bp) protein (344aa)
Peptidase, M16B family bin=GWC2_Methylomirabilis_70_16 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M16 domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 10 items

View Taxonomy