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PLM3_127_b2_sep16_scaffold_2385

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_2385_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(63..2156)
DNA (2094bp) protein (698aa)
Transglycosylase SLT domain-containing protein bin=GWC2_Methylomirabilis_70_24 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lytic transglycosylase domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2385_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2166..2753)
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
CDP-alcohol phosphatidyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2385_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2754..5459)
DNA (2706bp) protein (902aa)
uridylyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uridylyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2385_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5535..6632
DNA (1098bp) protein (366aa)
Histidinol-phosphate aminotransferase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidinol-phosphate aminotransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2385_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6637..7146)
DNA (510bp) protein (170aa)
Putative sensor histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MscS Mechanosensitive ion channel
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_2385_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7163..7510)
DNA (348bp) protein (116aa)
id=4698147 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2385_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7570..8523
DNA (954bp) protein (318aa)
Tat pathway signal sequence domain-containing protein 22 bin=GWF2_Methylomirabilis_70_14 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S58, DmpA
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_2385_8
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8540..9472)
DNA (933bp) protein (311aa)
TRAP dicarboxylate transporter, DctM subunit Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTC2_DESOH
TRAP dicarboxylate transporter subunit DctM
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM3_127_b2_sep16_scaffold_2385_9
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9445..9840)
DNA (396bp) protein (132aa)
TRAP dicarboxylate transporter subunit DctM-like protein Tax=Thalassospira profundimaris WP0211 RepID=K2M9F6_9PROT
TRAP dicarboxylate transporter, DctM subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_127_b2_sep16_scaffold_2385_10
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9902..10417)
DNA (516bp) protein (172aa)
TRAP-type C4-dicarboxylate transport system, small permease component Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0G8_DESTA
TRAP-type C4-dicarboxylate transport system, small permease component
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:AFM23059.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3_127_b2_sep16_scaffold_2385_11
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10451..11485)
DNA (1035bp) protein (345aa)
C4-dicarboxylate ABC transporter Tax=Caldimonas manganoxidans RepID=UPI00037316EE
dctP4; putative C4-dicarboxylate-binding periplasmic protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM3_127_b2_sep16_scaffold_2385_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11482..12531)
DNA (1050bp) protein (350aa)
Gentisate 1,2-dioxygenase Tax=Cupriavidus basilensis OR16 RepID=H1S8P6_9BURK
gentisate 1,2-dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_2385_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12601..12957)
DNA (357bp) protein (119aa)
Alpha/beta hydrolase fold family protein 8 bin=GWC2_Methylomirabilis_70_24 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alpha/beta hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_2385_14
unknown

Not on your lists

12963..13070
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 14 items

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