ggKbase home page

PLM3_127_b2_sep16_scaffold_31771

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_31771_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1..438
DNA (438bp) protein (146aa)
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator bin=bin7_NC10_sister species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferric uptake regulator, Fur family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_31771_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

482..931
DNA (450bp) protein (150aa)
Rubrerythrin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rbr; rubrerythrin
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_31771_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

941..2203
DNA (1263bp) protein (421aa)
glpC; ferredoxin bin=bin7_NC10_sister species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative fe-S oxidoreductase
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_31771_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2200..2817
DNA (618bp) protein (206aa)
hypothetical protein bin=bin7_NC10_sister species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
fructose-bisphosphate aldolase
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_31771_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2881..3639)
DNA (759bp) protein (253aa)
PF06181 domain protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_31771_6
Sclerotinia sclerotiorum, Sclerotinia, Helotiales, Leotiomycetes, Ascomycota, Fungi

Not on your lists

comp(3694..3927)
DNA (234bp) protein (78aa)
Predicted protein Tax=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) RepID=A7EI09_SCLS1
Predicted protein {ECO:0000313|EMBL:EDO02475.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia.;" source="Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White; mold) (Whetzelinia sclerotiorum).;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_31771_trna_1
unknown

Not on your lists

4039..4111
DNA (73bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_31771_7
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4138..4758)
DNA (621bp) protein (207aa)
Phospholipase D/Transphosphatidylase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHL9_DESAR
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:AEB09206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
Displaying 8 items

View Taxonomy