ggKbase home page

PLM3_127_b2_sep16_scaffold_11020

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11020_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..843)
DNA (843bp) protein (281aa)
luciferase-like protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_11020_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(846..2018)
DNA (1173bp) protein (391aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01364.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
L-carnitine dehydratase/bile acid-inducible protein F bin=bin7_NC10_sister species=Burkholderia sp. RPE64 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
PLM3_127_b2_sep16_scaffold_11020_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2045..2233)
DNA (189bp) protein (63aa)
Acyl-CoA transferase/carnitine dehydratase bin=GWF2_Methylomirabilis_70_14 species=Amycolatopsis mediterranei genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative CoA-transferase family III protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11020_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2265..3071)
DNA (807bp) protein (269aa)
Alpha/beta hydrolase fold protein Tax=Pseudomonas sp. (strain M1) RepID=L1HLY3_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:ETX07490.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
alpha/beta hydrolase
PLM3_127_b2_sep16_scaffold_11020_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3068..4129)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00035F34A7
Uncharacterized protein {ECO:0000313|EMBL:ETX07489.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
luciferase family protein
PLM3_127_b2_sep16_scaffold_11020_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4354..5340)
DNA (987bp) protein (329aa)
(S)-2-hydroxy-acid oxidase bin=GWA2_Methylomirabilis_73_35 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_11020_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

5639..7012
DNA (1374bp) protein (458aa)
Glutamine synthetase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6F6_CALAS
glnA; glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:BAM00844.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3_127_b2_sep16_scaffold_11020_8
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7012..7917
DNA (906bp) protein (302aa)
Amidohydrolase 2 Tax=Calothrix sp. PCC 7507 RepID=K9PEZ1_9CYAN
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AFY31516.1}; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM3_127_b2_sep16_scaffold_11020_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7997..8491
DNA (495bp) protein (165aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_11020_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8912..9085)
DNA (174bp) protein (58aa)
Acyl-CoA dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_11020_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9082..10350)
DNA (1269bp) protein (423aa)
Uncharacterized protein Tax=Bordetella bronchiseptica RepID=K4TA35_BORBO
hypothetical protein
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:KDD57970.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
PLM3_127_b2_sep16_scaffold_11020_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10637..11863)
DNA (1227bp) protein (409aa)
Cytochrome P450 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THY2_TISMK
Uncharacterized protein {ECO:0000313|EMBL:ETX02578.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
pksS; cytochrome P450
PLM3_127_b2_sep16_scaffold_11020_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12397..12975)
DNA (579bp) protein (193aa)
(S)-2-hydroxy-acid oxidase bin=GWA2_Methylomirabilis_73_35 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 13 items

View Taxonomy