ggKbase home page

PLM3_127_b2_sep16_scaffold_11709

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11709_1

Not on your lists

3..257
DNA (255bp) protein (85aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Methylosinus trichosporium OB3b RepID=D5QRJ9_METTR
Uncharacterized protein {ECO:0000313|EMBL:KKK88140.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3_127_b2_sep16_scaffold_11709_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(291..533)
DNA (243bp) protein (81aa)
ATP-dependent DNA ligase I (EC:6.5.1.1)
Probable DNA ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_11709_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

727..1515
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA97_CONWI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b2_sep16_scaffold_11709_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1664..1912
DNA (249bp) protein (83aa)
Inner-membrane translocator bin=GWA2_Methylomirabilis_73_35 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM3_127_b2_sep16_scaffold_11709_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1873..2436
DNA (564bp) protein (188aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family bin=GWF2_Methylomirabilis_70_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter membrane protein 1, HAAT family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_11709_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2450..3469
DNA (1020bp) protein (340aa)
ABC-type transporter, integral membrane subunit bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_11709_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3466..4707
DNA (1242bp) protein (414aa)
Extracellular ligand-binding receptor bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_11709_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4724..5485
DNA (762bp) protein (254aa)
ABC transporter permease protein bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_11709_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5531..6235
DNA (705bp) protein (235aa)
ABC transporter related bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_11709_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6250..6822
DNA (573bp) protein (191aa)
luciferase-like monooxygenase Tax=Bacillus sp. 10403023 RepID=UPI000288D90A
luciferase-like monooxygenase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 10 items

View Taxonomy