ggKbase home page

PLM3_127_b2_sep16_scaffold_11951

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_11951_1
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1..309
DNA (309bp) protein (103aa)
Glycosyl transferase group 1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU05_OPITP
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_127_b2_sep16_scaffold_11951_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

477..1031
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FUD7_ECHVK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_127_b2_sep16_scaffold_11951_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1431..1727)
DNA (297bp) protein (99aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein bin=GWF2_Methylomirabilis_70_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transposase IS204/IS1001/IS1096/IS1165 family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_11951_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1733..1924)
DNA (192bp) protein (64aa)
transposase IS204/IS1001/IS1096/IS1165 family protein Tax=Schlesneria paludicola RepID=UPI00029AF3AE
transposase IS204/IS1001/IS1096/IS1165 family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_127_b2_sep16_scaffold_11951_5
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1897..2262)
DNA (366bp) protein (122aa)
Periplasmic nitrate reductase, large subunit Tax=Thiocapsa marina 5811 RepID=F9UHK7_9GAMM
nitrate reductase catalytic subunit
Tax=CG_Delta_07
PLM3_127_b2_sep16_scaffold_11951_6

Not on your lists

2428..3975
DNA (1548bp) protein (516aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
PLM3_127_b2_sep16_scaffold_11951_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3959..4849)
DNA (891bp) protein (297aa)
Taurine catabolism dioxygenase tauD/tfdA Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UGA6_ADVKW
taurine catabolism dioxygenase tauD/tfdA
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_11951_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4932..5162)
DNA (231bp) protein (77aa)
id=2914531 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 8 items

View Taxonomy