ggKbase home page

PLM3_127_b2_sep16_scaffold_6198

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6198_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..555)
DNA (555bp) protein (185aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase/ligase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_6198_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(548..2110)
DNA (1563bp) protein (521aa)
high-affinity branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter related protein bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6198_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2136..3461)
DNA (1326bp) protein (442aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6198_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3479..4555)
DNA (1077bp) protein (359aa)
Branched-chain amino acid transport system permease protein LivM Tax=Caenispirillum salinarum AK4 RepID=K9GWM9_9PROT
inner-membrane translocator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6198_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4700..5638)
DNA (939bp) protein (313aa)
ABC transporter permease Tax=Oceanibaculum indicum P24 RepID=K2JUL1_9PROT
Inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_6198_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5635..6507)
DNA (873bp) protein (291aa)
ABC branched amino acid transporter family, ATPase subunit Tax=Labrenzia aggregata IAM 12614 RepID=A0NNM9_9RHOB
branched-chain amino acid ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_6198_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6508..8418)
DNA (1911bp) protein (637aa)
AMP-dependent synthetase and ligase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8R3_AMMDK
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_6198_8
unknown

Not on your lists

8695..8823
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 8 items

View Taxonomy