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PLM3_127_b2_sep16_scaffold_6882

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_6882_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..681
DNA (681bp) protein (227aa)
Bll0351 protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_6882_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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704..1033
DNA (330bp) protein (110aa)
Carboxymuconolactone decarboxylase bin=GWF2_Methylomirabilis_70_14 species=Yersinia bercovieri genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxymuconolactone decarboxylase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_6882_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1043..1981
DNA (939bp) protein (313aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_6882_4
unknown

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comp(2059..2301)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6882_5
unknown

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comp(2422..2580)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6882_6
unknown

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comp(2593..2922)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6882_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3204..3845
DNA (642bp) protein (214aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b2_sep16_scaffold_6882_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3842..4966
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Bordetella bronchiseptica 253 RepID=K4QMG2_BORBO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_6882_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4963..5766
DNA (804bp) protein (268aa)
Putative alpha/beta-hydrolase Tax=uncultured microorganism RepID=E0X6N0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETX08448.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
alpha/beta hydrolase
PLM3_127_b2_sep16_scaffold_6882_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5775..7004
DNA (1230bp) protein (410aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036D2244
Uncharacterized protein {ECO:0000313|EMBL:ETX08447.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
luciferase-like monooxygenase
PLM3_127_b2_sep16_scaffold_6882_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..7799
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR Tax=Ralstonia sp. PBA RepID=I9KPI4_9RALS
short chain dehydrogenase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_6882_12
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7888..8358
DNA (471bp) protein (157aa)
neuA; CMP-N-acetlyneuraminic acid synthetase (EC:2.7.7.43)
Cupin 2 conserved barrel domain protein Tax=Pseudanabaena biceps PCC 7429 RepID=L8N2T9_9CYAN
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ELS34011.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
PLM3_127_b2_sep16_scaffold_6882_13
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8346..9185
DNA (840bp) protein (280aa)
ubiE3; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
hypothetical protein Tax=Phaeobacter gallaeciensis RepID=UPI000302098C
SAM-dependent methyltransferase {ECO:0000313|EMBL:KFG68810.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
PLM3_127_b2_sep16_scaffold_6882_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9212..9514
DNA (303bp) protein (101aa)
Sec-independent protein translocase protein TatA Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P1Q4_9FIRM
twin arginine-targeting protein translocase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_6882_15
unknown

Not on your lists

9454..10212
DNA (759bp) protein (253aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_6882_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10209..10700
DNA (492bp) protein (164aa)
Alcohol dehydrogenase, zinc-binding domain protein bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium vanbaalenii genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Zn-dependent alcohol dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_6882_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10743..11885
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
putative hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_127_b2_sep16_scaffold_6882_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11902..13098
DNA (1197bp) protein (399aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
putative hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3_127_b2_sep16_scaffold_6882_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14229..15578
DNA (1350bp) protein (450aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C565_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ETW98735.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
PLM3_127_b2_sep16_scaffold_6882_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15518..16084
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW98735.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Displaying 20 items

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