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PLM3_127_b2_sep16_scaffold_4091

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_4091_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
Periplasmic thioredoxin (Cytochrome c biogenesis) bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(408..2354)
DNA (1947bp) protein (649aa)
cycK; cytochrome c-type biogenesis protein cycK bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cycK; cytochrome c-type biogenesis protein cycK
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2351..2791)
DNA (441bp) protein (147aa)
ccmE; cytochrome c-type biogenesis protein CcmE bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccmE; cytochrome c-type biogenesis protein CcmE
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_4091_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2788..2916)
DNA (129bp) protein (43aa)
id=4796929 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2921..3565)
DNA (645bp) protein (215aa)
Heme ABC transporter (Heme exporter protein C), permease protein (Cytochrome c biogenesis) bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4091_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3565..4245)
DNA (681bp) protein (227aa)
Cytochrome c-type biogenesis protein CcmB bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heme exporter, protein B
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b2_sep16_scaffold_4091_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4242..4955)
DNA (714bp) protein (238aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
heme exporter protein CcmA
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5015..5872)
DNA (858bp) protein (286aa)
Protease HtpX homolog bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M48, Ste24p
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(5942..6829)
DNA (888bp) protein (296aa)
adenine-specific DNA methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:ABU57180.1}; EC=2.1.1.72 {ECO:0000313|EMBL:ABU57180.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
Site-specific DNA-methyltransferase (Adenine-specific) Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI80_ROSCS
PLM3_127_b2_sep16_scaffold_4091_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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7000..7509
DNA (510bp) protein (170aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_4091_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7555..7737
DNA (183bp) protein (61aa)
RpmF: 50S ribosomal protein L32 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmF; 50S ribosomal protein L32 RpmF
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7763..8788
DNA (1026bp) protein (342aa)
Phosphate acyltransferase bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
plsX; acyl-(acyl carrier protein)--phosphate acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_4091_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8785..9483
DNA (699bp) protein (233aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 13 items

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