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PLM3_127_b2_sep16_scaffold_7006

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_7006_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..1398
DNA (1398bp) protein (466aa)
DNA primase bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_7006_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1431..3230
DNA (1800bp) protein (600aa)
RNA polymerase sigma factor RpoD bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpoD; RNA polymerase sigma factor RpoD
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_7006_trna_1
unknown

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3254..3326
DNA (73bp)
transferRNA Met
PLM3_127_b2_sep16_scaffold_7006_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3396..4103
DNA (708bp) protein (236aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_7006_4
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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4198..4647
DNA (450bp) protein (150aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Ribonuclease H Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5L6_DESAP
ribonuclease H
PLM3_127_b2_sep16_scaffold_7006_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4705..5283
DNA (579bp) protein (193aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_7006_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5280..5765
DNA (486bp) protein (162aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_7006_7
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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7082..7708
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D489_9BACT
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3_127_b2_sep16_scaffold_7006_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7713..7889)
DNA (177bp) protein (59aa)
hypothetical protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_7006_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8077..8343)
DNA (267bp) protein (89aa)
Resolvase domain protein bin=GWA2_Elusimicrobia_69_24 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
site-specific recombinase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 10 items

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