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PLM3_127_b2_sep16_scaffold_23643

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_23643_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..257
DNA (255bp) protein (85aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
divergent polysaccharide deacetylase domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_23643_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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274..1275
DNA (1002bp) protein (334aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp)
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_23643_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1275..2357
DNA (1083bp) protein (361aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_23643_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2415..3542
DNA (1128bp) protein (376aa)
Putative Nitrogen assimilation transcription regulatory protein (NtrC)(Synonyms:glnT, glnG) bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_23643_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3539..4045
DNA (507bp) protein (169aa)
Putative Nitrogen assimilation transcription regulatory protein (NtrC)(Synonyms:glnT, glnG) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG)
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_23643_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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4164..5159
DNA (996bp) protein (332aa)
Uroporphyrinogen decarboxylase (URO-D) Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THU7_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_127_b2_sep16_scaffold_23643_7
unknown

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5452..5703
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_23643_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5804..7468)
DNA (1665bp) protein (555aa)
Phosphomethylpyrimidine synthase bin=GWC2_Methylomirabilis_70_16 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine biosynthesis protein ThiC
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_23643_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(7620..8582)
DNA (963bp) protein (321aa)
Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein,GAF domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
His Kinase A (phosphoacceptor) domain protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 9 items

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