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PLM3_127_b2_sep16_scaffold_12117

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_12117_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(68..400)
DNA (333bp) protein (111aa)
Export-related chaperone CsaA bin=GWC2_Methylomirabilis_70_16 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
csaA; export-related chaperone CsaA
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_12117_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(421..1470)
DNA (1050bp) protein (350aa)
SpoIID/LytB domain protein bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cell division protein, SpoIID family
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_12117_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1527..1754)
DNA (228bp) protein (76aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_12117_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1766..2800)
DNA (1035bp) protein (345aa)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWC2_Methylomirabilis_70_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Holliday junction ATP-dependent DNA helicase ruvB
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_12117_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2797..3465)
DNA (669bp) protein (223aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWC2_Methylomirabilis_70_16 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNA recombination protein RuvA domain I
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_12117_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3530..4024)
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC bin=GWC2_Methylomirabilis_70_16 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
crossover junction endodeoxyribonuclease RuvC
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_12117_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4038..4790)
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein DAMO_2401 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_12117_8
unknown

Not on your lists

5157..5558
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_12117_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5864..6475)
DNA (612bp) protein (204aa)
Oligopeptide/dipeptide ABC transporter, peptide-binding protein bin=GWC2_Methylomirabilis_70_16 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative oligopeptide ABC transporter, substrate binding protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 9 items

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