ggKbase home page

PLM3_127_b2_sep16_scaffold_35904

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_35904_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1..723
DNA (723bp) protein (241aa)
Putative dehydrogenase Tax=Bradyrhizobium sp. WSM471 RepID=H5YAN0_9BRAD
oxidoreductase , NAD-binding Rossmann fold family protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b2_sep16_scaffold_35904_2
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(745..1560)
DNA (816bp) protein (272aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAI5_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KJS12955.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
peptide ABC transporter permease
PLM3_127_b2_sep16_scaffold_35904_3
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1561..2424)
DNA (864bp) protein (288aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7H2_DEIPD
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AFZ69404.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
PLM3_127_b2_sep16_scaffold_35904_4
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2465..2815)
DNA (351bp) protein (117aa)
ABC transporter substrate-binding protein Tax=Brevibacillus brevis RepID=UPI000363482D
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL26406.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_35904_5
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2761..3984)
DNA (1224bp) protein (408aa)
hypothetical protein Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002E38DD0
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGP79683.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
ABC transporter substrate-binding protein
PLM3_127_b2_sep16_scaffold_35904_6
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3981..5150)
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000377F599
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67474.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
peptidase M20
PLM3_127_b2_sep16_scaffold_35904_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..5578)
DNA (429bp) protein (143aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ACA19671.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ACA19671.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
Amidase, hydantoinase/carbamoylase family Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQZ8_METS4
allantoate amidohydrolase
PLM3_127_b2_sep16_scaffold_35904_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5563..6408)
DNA (846bp) protein (282aa)
allantoate amidohydrolase (EC:3.5.1.87)
N-carbamoyl-L-amino acid amidohydrolase Tax=alpha proteobacterium BAL199 RepID=A8TQF0_9PROT
N-carbamoyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:EDP65032.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM3_127_b2_sep16_scaffold_35904_9
unknown

Not on your lists

comp(6460..6564)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_35904_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6699..7010)
DNA (312bp) protein (104aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 10 items

View Taxonomy