ggKbase home page

PLM3_127_b2_sep16_scaffold_40078

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_40078_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..301
DNA (300bp) protein (100aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b2_sep16_scaffold_40078_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(470..859)
DNA (390bp) protein (130aa)
RNP-1 like RNA-binding protein bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RNP-1 like RNA-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_40078_3
unknown

Not on your lists

comp(1002..1217)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_40078_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1223..1633)
DNA (411bp) protein (137aa)
id=14625083 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_40078_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1822..2574)
DNA (753bp) protein (251aa)
Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Fis family transcriptional regulator
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_40078_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2552..3139)
DNA (588bp) protein (196aa)
Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=CSP1_6_Rokubacteria
PLM3_127_b2_sep16_scaffold_40078_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3136..3411)
DNA (276bp) protein (92aa)
multi-sensor hybrid histidine kinase bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
PAS domain S-box
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 7 items

View Taxonomy