ggKbase home page

PLM3_127_b2_sep16_scaffold_27321_5

Organism: PLM3_127_b2_sep16_Rokubacteria_68_9

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: 3263..3661

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 134.0
  • Bit_score: 187
  • Evalue 7.50e-45
RNA polymerase sigma factor sigW similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 151.0
  • Bit_score: 96
  • Evalue 4.90e-18
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 134.0
  • Bit_score: 187
  • Evalue 1.00e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 399
GTGGCGCGGCGCCTCTTGGGGTCGCGGGCCGACGCTGAGGATGCTGTACAGCGCGCGCTCCTCCAGTGTTACCTGGGAGCGGGGACGTACCGCTCCGAGTGGGCCGTGTCCACGTGGCTCTACCGGATCCTGACCAATGTCTGCATGGACGAGCTCAGGCGCCGCAAGAGCCGCTCGGGCGAGCTCGAGCCCCCGGCGCGCCCCGATCCGCCGGGTGAACACGTCGACCTCCGCCGCGCGCTCCACCGCGTGCCGACTGAGGCGCGCGTGCTCCTGGCGCTGCGGTACGTGGACGGGCTCTCCTATGGCGAGCTCGCGCGTATCCGCGGCATCTCGGTCAACACGGTGAAGAGCCAGCTCCGGCGGGGCAAGGGCCTGCTCAAGGCTGCGCTCACCAAA
PROTEIN sequence
Length: 133
VARRLLGSRADAEDAVQRALLQCYLGAGTYRSEWAVSTWLYRILTNVCMDELRRRKSRSGELEPPARPDPPGEHVDLRRALHRVPTEARVLLALRYVDGLSYGELARIRGISVNTVKSQLRRGKGLLKAALTK