ggKbase home page

PLM3_127_b2_sep16_scaffold_27321

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_27321_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..220
DNA (219bp) protein (73aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b2_sep16_scaffold_27321_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

217..1383
DNA (1167bp) protein (389aa)
Acyl-CoA dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase-like
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b2_sep16_scaffold_27321_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1419..2261
DNA (843bp) protein (281aa)
PfkB domain protein bin=GWC2_Methylomirabilis_70_16 species=Chloroflexus aurantiacus genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ribokinase-like domain-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_27321_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2327..2977
DNA (651bp) protein (217aa)
Probable transaldolase bin=GWC2_Methylomirabilis_70_16 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transaldolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b2_sep16_scaffold_27321_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3263..3661
DNA (399bp) protein (133aa)
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA polymerase sigma factor sigW
Tax=CSP1_6_Rokubacteria
Displaying 5 items

View Taxonomy