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PLM3_127_b2_sep16_Rokubacteria_68_9

PLM3_127cm_b2_sep2016_Rokubacteria_68_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  rokubacteria_ggkbase

Consensus taxonomy: Rokubacteria  →  Bacteria

Displaying items 301-350 of 674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_40288
Domain: Bacteria (100%)
5 2556 bp 68.04 6.75 91.43
PLM3_127_b2_sep16_scaffold_23643
Species: GWC2_Rokubacteria_70_16_curated (55.56%)
9 8583 bp 69.52 8.81 91.47
PLM3_127_b2_sep16_scaffold_26100
Phylum: Rokubacteria (75%)
4 3291 bp 67.00 8.80 91.52
PLM3_127_b2_sep16_scaffold_43265
Phylum: Rokubacteria (66.67%)
3 3199 bp 68.90 8.25 91.53
PLM3_127_b2_sep16_scaffold_20266
Genus: Candidatus Entotheonella (50%)
4 3805 bp 66.41 7.84 91.54
PLM3_127_b2_sep16_scaffold_7017
Domain: Bacteria (100%)
8 7763 bp 67.74 8.97 91.59
PLM3_127_b2_sep16_scaffold_8234
Domain: Bacteria (80%)
10 6393 bp 69.87 7.58 91.60
PLM3_127_b2_sep16_scaffold_12206
Domain: Bacteria (88.89%)
9 9606 bp 69.64 8.29 91.63
PLM3_127_b2_sep16_scaffold_46302
Domain: Bacteria (100%)
5 4567 bp 68.51 11.00 91.64
PLM3_127_b2_sep16_scaffold_32272
Domain: Bacteria (100%)
3 2910 bp 68.28 8.76 91.65
PLM3_127_b2_sep16_scaffold_12979
Species: GWA2_Rokubacteria_70_23_curated (75%)
8 4916 bp 67.39 10.62 91.66
PLM3_127_b2_sep16_scaffold_145785
Phylum: Proteobacteria (57.14%)
7 2784 bp 65.66 5.82 91.70
PLM3_127_b2_sep16_scaffold_82161
Phylum: Rokubacteria (66.67%)
6 3343 bp 69.04 7.31 91.71
PLM3_127_b2_sep16_scaffold_32366
Phylum: Rokubacteria (60%)
5 5352 bp 67.96 9.78 91.82
PLM3_127_b2_sep16_scaffold_28913
Domain: Bacteria (60%)
5 3104 bp 66.46 8.26 91.82
PLM3_127_b2_sep16_scaffold_20850
Species: GWA2_Rokubacteria_70_23_curated (50%)
6 7198 bp 69.10 10.57 91.82
PLM3_127_b2_sep16_scaffold_11720
Domain: Bacteria (85.71%)
7 5221 bp 69.05 9.11 91.86
PLM3_127_b2_sep16_scaffold_27432
Phylum: Proteobacteria (50%)
4 3200 bp 65.78 10.88 91.88
PLM3_127_b2_sep16_scaffold_30104
Phylum: Rokubacteria (66.67%)
9 6887 bp 69.30 8.25 91.91
PLM3_127_b2_sep16_scaffold_16938
Phylum: Proteobacteria (50%)
8 7595 bp 67.82 5.98 91.92
PLM3_127_b2_sep16_scaffold_5766
Class: Alphaproteobacteria (50%)
8 7795 bp 68.43 10.03 91.98
PLM3_127_b2_sep16_scaffold_65229
Phylum: Rokubacteria (50%)
6 2658 bp 67.68 8.30 91.99
PLM3_127_b2_sep16_scaffold_5304
Domain: Bacteria (90.91%)
11 13902 bp 68.88 7.30 92.04
PLM3_127_b2_sep16_scaffold_14492
Phylum: Proteobacteria (50%)
8 4617 bp 68.12 12.61 92.07
PLM3_127_b2_sep16_scaffold_25412
Domain: Bacteria (80%)
5 3339 bp 68.79 8.85 92.09
PLM3_127_b2_sep16_scaffold_25259
Domain: Bacteria (100%)
13 13332 bp 68.20 9.73 92.15
PLM3_127_b2_sep16_scaffold_6013
Phylum: Rokubacteria (64.29%)
14 7603 bp 66.70 9.71 92.17
PLM3_127_b2_sep16_scaffold_37756
Phylum: Rokubacteria (66.67%)
3 2655 bp 67.68 8.76 92.20
PLM3_127_b2_sep16_scaffold_46315
Species: GWA2_Rokubacteria_70_23_curated (100%)
3 3513 bp 70.05 10.08 92.31
PLM3_127_b2_sep16_scaffold_90598
Phylum: Rokubacteria (50%)
6 2842 bp 70.06 6.86 92.36
PLM3_127_b2_sep16_scaffold_68472
Phylum: Rokubacteria (57.14%)
7 3283 bp 70.94 8.04 92.38
PLM3_127_b2_sep16_scaffold_11370
Domain: Bacteria (84.62%)
13 9351 bp 69.33 7.52 92.40
PLM3_127_b2_sep16_scaffold_46381
Phylum: Rokubacteria (50%)
4 2811 bp 68.66 8.27 92.42
PLM3_127_b2_sep16_scaffold_29094
Species: GWC2_Rokubacteria_70_16_curated (60%)
5 3092 bp 67.21 7.18 92.46
PLM3_127_b2_sep16_scaffold_5116
Domain: Bacteria (84.62%)
13 8316 bp 67.33 7.20 92.53
PLM3_127_b2_sep16_scaffold_24805
Phylum: Rokubacteria (66.67%)
3 3384 bp 70.36 11.21 92.55
PLM3_127_b2_sep16_scaffold_33134
Species: R_Rokubacteria_68_19 (50%)
6 4906 bp 68.08 7.37 92.58
PLM3_127_b2_sep16_scaffold_7519
Phylum: Rokubacteria (66.67%)
6 6736 bp 68.33 9.17 92.59
PLM3_127_b2_sep16_scaffold_39937
Species: GWA2_Rokubacteria_70_23_curated (66.67%)
3 2569 bp 70.34 9.69 92.60
PLM3_127_b2_sep16_scaffold_25078
Species: RLO_Rokubacteria_71_22 (50%)
4 3824 bp 70.92 7.57 92.65
PLM3_127_b2_sep16_scaffold_39645
Phylum: Rokubacteria (60%)
5 4286 bp 67.71 7.91 92.67
PLM3_127_b2_sep16_scaffold_62813
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 3240 bp 69.60 7.73 92.69
PLM3_127_b2_sep16_scaffold_11775
Phylum: Rokubacteria (60%)
5 5206 bp 71.11 11.24 92.72
PLM3_127_b2_sep16_scaffold_9048
Phylum: Rokubacteria (57.14%)
7 6060 bp 69.01 10.07 92.72
PLM3_127_b2_sep16_scaffold_59847
Species: CSP1_6_Rokubacteria (100%)
2 2530 bp 68.26 8.30 92.73
PLM3_127_b2_sep16_scaffold_4748
Domain: Bacteria (87.5%)
8 8669 bp 69.10 9.46 92.74
PLM3_127_b2_sep16_scaffold_25002
Phylum: Rokubacteria (60%)
5 3370 bp 69.20 8.59 92.76
PLM3_127_b2_sep16_scaffold_83384
Species: GWA2_Rokubacteria_70_23_curated (60%)
5 3347 bp 67.73 10.17 92.77
PLM3_127_b2_sep16_scaffold_45402
Phylum: Rokubacteria (87.5%)
8 4417 bp 70.52 7.44 92.78
PLM3_127_b2_sep16_scaffold_22817
Domain: Bacteria (80%)
5 4091 bp 68.81 7.15 92.84
Displaying items 301-350 of 674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.