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PLM3-1_200_b2_sep16_scaffold_85

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b2_sep16_scaffold_85_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..722
DNA (720bp) protein (240aa)
Phosphate transport ATP-binding protein PstB Tax=Methylophaga lonarensis MPL RepID=M7P0W1_9GAMM
phosphate transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_85_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

796..1482
DNA (687bp) protein (229aa)
Phosphate-specific transport system accessory protein PhoU Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M898_GEODF
phosphate uptake regulator PhoU
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1488..2198
DNA (711bp) protein (237aa)
Response regulator with a winged-helix DNA-binding domain Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSJ4_SYNAS
response regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_85_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2176..4008
DNA (1833bp) protein (611aa)
Sensor protein yycG (EC:2.7.13.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Sensor protein yycG (EC:2.7.13.3)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_5
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(4016..4402)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NUK3_9SPHI
hypothetical protein
Tax=RBG_16_Planctomycetes_41_13_curated
PLM3-1_200_b2_sep16_scaffold_85_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4452..6005)
DNA (1554bp) protein (518aa)
Propionyl-CoA carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
propionyl-CoA carboxylase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6007..7146)
DNA (1140bp) protein (380aa)
Sodium ion-translocating decarboxylase, beta subunit bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sodium ion-translocating decarboxylase subunit beta
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_85_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7156..7302)
DNA (147bp) protein (49aa)
id=1839691 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_85_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7330..7545)
DNA (216bp) protein (72aa)
Na(+)-transporting decarboxylase biotin carrier protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acetyl/propionyl-CoA carboxylase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7724..7918
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_200_b2_sep16_scaffold_85_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7915..8403
DNA (489bp) protein (163aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_200_b2_sep16_scaffold_85_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8502..9599
DNA (1098bp) protein (366aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10015..10566
DNA (552bp) protein (184aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=[Clostridium] hiranonis genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10596..11180
DNA (585bp) protein (195aa)
Glycerol-3-phosphate acyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
plsY; hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_15
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(11218..12246)
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PDS5_9BACT
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3-1_200_b2_sep16_scaffold_85_16
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(12261..13646)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ19_CHLT3
hypothetical protein
Tax=RBG_16_Nitrospirae_43_11_curated
PLM3-1_200_b2_sep16_scaffold_85_17
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(13640..14305)
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PDS3_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
PLM3-1_200_b2_sep16_scaffold_85_18
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(14268..14858)
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PDS2_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM3-1_200_b2_sep16_scaffold_85_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14955..15719)
DNA (765bp) protein (255aa)
Putative Daunorubicin resistance ABC transporter, membrane protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative daunorubicin resistance ABC transporter membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_85_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15712..16743)
DNA (1032bp) protein (344aa)
drrA; daunorubicin resistance ABC transporter ATP-binding protein (EC:3.6.3.-)
Daunorubicin resistance ABC transporter, ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16801..17784
DNA (984bp) protein (328aa)
Putative TIM-barrel fold metal-dependent hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase family protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_85_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17899..19113
DNA (1215bp) protein (405aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI0003183DD2
metallopeptidase M24 family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_85_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19231..20445
DNA (1215bp) protein (405aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI0003183DD2
proline dipeptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_85_24
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20442..22664)
DNA (2223bp) protein (741aa)
Helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_85_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22974..24287
DNA (1314bp) protein (438aa)
CBS domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_85_26
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24366..25985)
DNA (1620bp) protein (540aa)
60 kDa chaperonin 2 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_27
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26001..26291)
DNA (291bp) protein (97aa)
10 kDa chaperonin bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Co-chaperonin GroES
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_85_28
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26450..27076
DNA (627bp) protein (209aa)
Glutathione S-transferase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG2_RUBXD
glutathione S-transferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_29
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27149..27706
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Marinobacter sp. BSs20148 RepID=M1FDX3_9ALTE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_85_30
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27718..28254
DNA (537bp) protein (179aa)
Cupin 2, conserved barrel Tax=Marinobacter algicola DG893 RepID=A6EYV9_9ALTE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 30 items

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