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PLM3-1_200_b2_sep16_scaffold_218

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b2_sep16_scaffold_218_1
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(3..116)
DNA (114bp) protein (38aa)
Tax=CG_Elusi_02
PLM3-1_200_b2_sep16_scaffold_218_2
unknown

Not on your lists

283..486
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3-1_200_b2_sep16_scaffold_218_3
unknown

Not on your lists

742..852
DNA (111bp) protein (37aa)

This feature has no annotations

PLM3-1_200_b2_sep16_scaffold_218_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1039..2091
DNA (1053bp) protein (351aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_218_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2260..3984
DNA (1725bp) protein (575aa)
Proline--tRNA ligase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
proS; prolyl-tRNA ligase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_218_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3988..4749
DNA (762bp) protein (254aa)
Orotidine 5'-phosphate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
orotidine 5'-phosphate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b2_sep16_scaffold_218_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4795..5964
DNA (1170bp) protein (390aa)
GTP cyclohydrolase II (EC:3.5.4.25 4.1.2.-)
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_218_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5988..6197
DNA (210bp) protein (70aa)
Regulatory protein, FmdB family Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30Y30_DESDG
FmdB family regulatory protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_200_b2_sep16_scaffold_218_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6194..6718)
DNA (525bp) protein (175aa)
id=2065166 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_218_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6740..7732)
DNA (993bp) protein (331aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_218_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7891..8112)
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_218_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8213..9148
DNA (936bp) protein (312aa)
2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) (EC:1.1.1.169) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) (EC:1.1.1.169)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_218_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9260..10045
DNA (786bp) protein (262aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI00036F1FDE
cytochrome subunit of sorbitol dehydrogenase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_218_14
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10051..11238)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YS01_9ALTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ05001.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
major facilitator transporter
PLM3-1_200_b2_sep16_scaffold_218_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11305..11997)
DNA (693bp) protein (231aa)
queC; Queuosine biosynthesis protein queC (EC:3.5.-.-) bin=bin7_NC10_sister species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
queC; 7-cyano-7-deazaguanine synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b2_sep16_scaffold_218_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11994..12737)
DNA (744bp) protein (248aa)
Ribosomal RNA large subunit methyltransferase E bin=GWD2_Deltaproteobacteria_55_8 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribosomal RNA methyltransferase RrmJ/FtsJ
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_218_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12691..13455)
DNA (765bp) protein (255aa)
OmpA/MotB domain protein bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
OmpA/MotB domain protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_218_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13694..14755
DNA (1062bp) protein (354aa)
nthA; nitrile hydratase, alpha subunit (EC:4.2.1.84)
nitrile hydratase Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002FC8EEC
Nitrile hydratase {ECO:0000313|EMBL:ETW95619.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3-1_200_b2_sep16_scaffold_218_19
unknown

Not on your lists

14846..15031
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_200_b2_sep16_scaffold_218_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15099..16058)
DNA (960bp) protein (320aa)
Putative UDP-glucose 4-epimerase bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_218_21
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16103..17212)
DNA (1110bp) protein (370aa)
YqhT protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Xaa-Pro aminopeptidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b2_sep16_scaffold_218_22
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17387..17680)
DNA (294bp) protein (98aa)
id=1985031 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b2_sep16_scaffold_218_23
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17696..18817)
DNA (1122bp) protein (374aa)
Chaperone protein DnaJ bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
DnaJ-class molecular chaperone with C-terminal Zn finger domain
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_200_b2_sep16_scaffold_218_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18942..19298)
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 24 items

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