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PLM3-1_200_b2_sep16_scaffold_8266

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b2_sep16_scaffold_8266_1
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


2..169
DNA (168bp) protein (56aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rplB; 50S ribosomal protein L2
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_200_b2_sep16_scaffold_8266_2
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


187..471
DNA (285bp) protein (95aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=bin8_Chloro species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S19
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


483..821
DNA (339bp) protein (113aa)
50S ribosomal protein L22 bin=GWC2_Chloroflexi_73_18 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L22
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_200_b2_sep16_scaffold_8266_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists


827..1090
DNA (264bp) protein (88aa)
Suspect SCG annotation. See neighboring gene [PLM3-1_200_b2_sep16_scaffold_8266_5].
rpsC; 30S ribosomal protein S3 bin=bin8_Chloro species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S3
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_200_b2_sep16_scaffold_8266_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


1159..1485
DNA (327bp) protein (109aa)
30S ribosomal protein S3 bin=GWC2_Chloroflexi_73_18 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
30S ribosomal protein S3
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_200_b2_sep16_scaffold_8266_6
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


1488..1928
DNA (441bp) protein (147aa)
50S ribosomal protein L16 bin=GWC2_Chloroflexi_73_18 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L16
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


1918..2124
DNA (207bp) protein (69aa)
50S ribosomal protein L29 bin=GWC2_Chloroflexi_73_18 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rpmC; 50S ribosomal protein L29
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


2135..2563
DNA (429bp) protein (143aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 bin=bin8_Chloro species=Alicyclobacillus acidoterrestris genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rpsQ; 30S ribosomal protein S17
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_200_b2_sep16_scaffold_8266_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


2560..2928
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L14
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


2928..3371
DNA (444bp) protein (148aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 bin=bin8_Chloro species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L24
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


3368..3910
DNA (543bp) protein (181aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
rplE; 50S ribosomal protein L5
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


3928..4113
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 bin=bin8_Chloro species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S14
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


4121..4519
DNA (399bp) protein (133aa)
30S ribosomal protein S8 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
30S ribosomal protein S8
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


4526..4999
DNA (474bp) protein (158aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
RplF; 50S ribosomal protein L6
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_200_b2_sep16_scaffold_8266_15
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


4996..5208
DNA (213bp) protein (71aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 bin=bin8_Chloro species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L18
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_16
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists


5367..5903
DNA (537bp) protein (179aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S5
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_200_b2_sep16_scaffold_8266_17
unknown

Not on your lists

5893..5967
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 17 items

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