ggKbase home page

PLM1_100_b1_sep16_scaffold_23424

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_23424_1
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

69..557
DNA (489bp) protein (163aa)
Uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_13_Nitrospirae_41_22_curated
PLM1_100_b1_sep16_scaffold_23424_2

Not on your lists

671..1348
DNA (678bp) protein (226aa)
Marine sediment metagenome DNA, contig: S01H1_S15689 {ECO:0000313|EMBL:GAG22100.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma factor
PLM1_100_b1_sep16_scaffold_23424_3

Not on your lists

1530..2117
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q096T0_STIAD
Marine sediment metagenome DNA, contig: S01H1_S21541 {ECO:0000313|EMBL:GAG14626.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_23424_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2753..3466
DNA (714bp) protein (238aa)
Glycosyl transferase group 1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1H4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT08388.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
PLM1_100_b1_sep16_scaffold_23424_5
unknown

Not on your lists

comp(3511..3627)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 5 items

View Taxonomy