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PLM1_100_b1_sep16_scaffold_9356

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_9356_1
unknown

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3..140
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_9356_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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260..547
DNA (288bp) protein (96aa)
Conserved protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q066_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKH81338.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_9356_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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544..744
DNA (201bp) protein (67aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PLM1_100_b1_sep16_scaffold_9356_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(671..1291)
DNA (621bp) protein (207aa)
extradiol ring-cleavage dioxygenase Tax=Frankia sp. Iso899 RepID=UPI0003B53B15
extradiol ring-cleavage dioxygenase class III protein subunit B
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM1_100_b1_sep16_scaffold_9356_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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1505..2701
DNA (1197bp) protein (399aa)
Methionine synthase vitamin-B12 independent Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ32_PSEUX
vitamin-B12 independent methionine synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM1_100_b1_sep16_scaffold_9356_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2798..3124
DNA (327bp) protein (109aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003797ED6
Uncharacterized protein {ECO:0000313|EMBL:ETW98826.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
BNR/Asp-box repeat family protein
PLM1_100_b1_sep16_scaffold_9356_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3106..3696
DNA (591bp) protein (197aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003797ED6
Uncharacterized protein {ECO:0000313|EMBL:ETW98826.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_9356_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4030..4956)
DNA (927bp) protein (309aa)
Peptide ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM1_100_b1_sep16_scaffold_9356_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4959..5912)
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97109.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptide ABC transporter permease
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
PLM1_100_b1_sep16_scaffold_9356_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6079..7725)
DNA (1647bp) protein (549aa)
Putative periplasmic dipeptide transport substrate-binding protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0H6_THERP
Uncharacterized protein {ECO:0000313|EMBL:ETW95976.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative periplasmic dipeptide transport substrate-binding protein
PLM1_100_b1_sep16_scaffold_9356_11
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7943..9583
DNA (1641bp) protein (547aa)
Thiamine pyrophosphate protein bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM1_100_b1_sep16_scaffold_9356_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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9943..10476
DNA (534bp) protein (178aa)
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase bin=GWC2_Methylomirabilis_70_16 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 12 items

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