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PLM1_100_b1_sep16_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 329 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_22_1
unknown

Not on your lists

1..186
DNA (186bp) protein (62aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_22_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(183..1808)
DNA (1626bp) protein (542aa)
Putative Fe-S oxidoreductase Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP20_ACIS0
putative Fe-S oxidoreductase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1868..2134)
DNA (267bp) protein (89aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2262..2909
DNA (648bp) protein (216aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2971..3774
DNA (804bp) protein (268aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000361561C
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3785..4378
DNA (594bp) protein (198aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4386..4682)
DNA (297bp) protein (99aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4687..5940)
DNA (1254bp) protein (418aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6250..6897
DNA (648bp) protein (216aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380E632
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_10
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

7335..8408
DNA (1074bp) protein (358aa)
PflMI Tax=Pseudomonas fluorescens RepID=F1KM53_PSEFL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
PLM1_100_b1_sep16_scaffold_22_11
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8474..10249
DNA (1776bp) protein (592aa)
Putative N-6 DNA methylase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQE4_METH6
Putative N-6 DNA methylase
Putative N-6 DNA methylase {ECO:0000313|EMBL:AET65497.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
PLM1_100_b1_sep16_scaffold_22_12
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10233..11591
DNA (1359bp) protein (453aa)
N-6 DNA methylase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQE3_METH6
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:AET65496.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
PLM1_100_b1_sep16_scaffold_22_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11750..12703
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U826_9CHLR
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12723..13694
DNA (972bp) protein (324aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGQ6_ACTMD
pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13660..14001)
DNA (342bp) protein (114aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14113..14877
DNA (765bp) protein (255aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_17
unknown

Not on your lists

14902..15579
DNA (678bp) protein (226aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_22_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15724..15975
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1C5Y2_9ZZZZ
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_22_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16058..16363
DNA (306bp) protein (102aa)
Ribonuclease VapC Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQW6_THEPS
PilT-like protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_22_20
unknown

Not on your lists

comp(16888..17604)
DNA (717bp) protein (239aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_22_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17922..18806
DNA (885bp) protein (295aa)
DNA polymerase Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLB7_9EURY
polB; DNA polymerase elongation subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18834..19655
DNA (822bp) protein (274aa)
Putative uncharacterized protein Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JL44_SYNJB
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19703..21508
DNA (1806bp) protein (602aa)
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_22_24
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

21508..26583
DNA (5076bp) protein (1692aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGW5_9BACT
beta-propeller repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM1_100_b1_sep16_scaffold_22_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(26622..26807)
DNA (186bp) protein (62aa)
Exodeoxyribonuclease 7 small subunit Tax=Anaerotruncus sp. CAG:390 RepID=R7EST7_9FIRM
exodeoxyribonuclease VII small subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(26804..28045)
DNA (1242bp) protein (414aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(28103..30001)
DNA (1899bp) protein (633aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JJ21_9ARCH
FHA domain-containing protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(30030..30584)
DNA (555bp) protein (185aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Euryarchaeota RepID=M9SFG8_9EURY
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(30571..31140)
DNA (570bp) protein (190aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003602188
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_22_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

31334..32038
DNA (705bp) protein (235aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
circadian clock protein, KaiC
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 329 in total

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