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PLM1_100_b1_sep16_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 240 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_117_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2..571
DNA (570bp) protein (190aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PR81_9FIRM
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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568..1230
DNA (663bp) protein (221aa)
lipoyl(octanoyl) transferase (EC:2.3.1.181)
hypothetical protein Tax=unclassified Crenarchaeota RepID=UPI00036C2B78
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1237..2304)
DNA (1068bp) protein (356aa)
Electron transfer flavoprotein, alpha subunit Tax=Geobacter metallireducens RepID=Q39TX9_GEOMG
electron transfer flavoprotein subunit alpha
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(2301..3113)
DNA (813bp) protein (271aa)
Electron transfer flavoprotein subunit beta Tax=Sporomusa ovata DSM 2662 RepID=T0I9V9_9FIRM
Electron transfer flavoprotein alpha/beta-subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3181..4470)
DNA (1290bp) protein (430aa)
FAD dependent oxidoreductase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQ94_SYNFM
FAD dependent oxidoreductase
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(4503..5102)
DNA (600bp) protein (200aa)
4-vinyl reductase 4VR Tax=Pseudanabaena biceps PCC 7429 RepID=L8MVQ8_9CYAN
putative hydrocarbon binding protein (contains V4R domain)
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5272..5586
DNA (315bp) protein (105aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI0003722417
4Fe-4S ferredoxin
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5665..6567
DNA (903bp) protein (301aa)
Lipoyl synthase, mitochondrial bin=GWA1_Deltaproteobacteria_52_35 species=Cyanidioschyzon merolae genus=Cyanidioschyzon taxon_order=Cyanidiales taxon_class=Bangiophyceae phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Lipoic acid synthetase
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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6573..7685
DNA (1113bp) protein (371aa)
pdhA; pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
3-methyl-2-oxobutanoate dehydrogenase subunit alpha bin=bin5_DeltaP species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7762..10698
DNA (2937bp) protein (979aa)
hypothetical protein Tax=Microbacterium sp. 292MF RepID=UPI00037B79A6
appA; oligopeptide ABC transporter
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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10721..11278
DNA (558bp) protein (186aa)
Acetyltransferase, ribosomal protein N-acetylase Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IIH8_THETR
acetyltransferase, ribosomal protein N-acetylase
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_12
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(11285..11758)
DNA (474bp) protein (158aa)
von Willebrand factor type A Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMP9_ARCVS
von Willebrand factor A
von Willebrand factor type A {ECO:0000313|EMBL:AEA46073.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
PLM1_100_b1_sep16_scaffold_117_13
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11712..14189)
DNA (2478bp) protein (826aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MCK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKG08945.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_117_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(14315..14842)
DNA (528bp) protein (176aa)
Cation efflux family protein (Fragment) Tax=uncultured bacterium RepID=K2E9G3_9BACT
cation efflux protein
Tax=RBG_16_Chloroflexi_51_9_curated
PLM1_100_b1_sep16_scaffold_117_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14961..16085)
DNA (1125bp) protein (375aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
Probable 3-isopropylmalate dehydrogenase Tax=Plesiocystis pacifica SIR-1 RepID=A6G3V7_9DELT
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_117_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(16136..16645)
DNA (510bp) protein (170aa)
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit Tax=uncultured prokaryote RepID=H5S9Q6_9ZZZZ
leuD; 3-isopropylmalate dehydratase small subunit LeuD
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_117_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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16724..17110
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QYV0_VULM7
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(17107..18363)
DNA (1257bp) protein (419aa)
leuC1; 3-isopropylmalate dehydratase large subunit 1 (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit Tax=mine drainage metagenome RepID=T1CS61_9ZZZZ
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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18460..19014
DNA (555bp) protein (185aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_20
unknown

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19053..19406
DNA (354bp) protein (118aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_117_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(19486..20742)
DNA (1257bp) protein (419aa)
Trans-homoaconitate synthase Tax=mine drainage metagenome RepID=T1BS23_9ZZZZ
isopropylmalate/citramalate/homocitrate synthase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(20825..21634)
DNA (810bp) protein (270aa)
SAM-dependent methyltransferase Tax=Streptomyces bottropensis ATCC 25435 RepID=M3DGL4_9ACTO
SAM-dependent methyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_23
unknown

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21747..21926
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_117_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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21949..22533
DNA (585bp) protein (195aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(22540..23214)
DNA (675bp) protein (225aa)
paaF; enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_117_26
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(23380..23739)
DNA (360bp) protein (120aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PLM1_100_b1_sep16_scaffold_117_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

23941..25611
DNA (1671bp) protein (557aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036F169E
AMP-dependent synthetase and ligase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_117_28
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

25699..26700
DNA (1002bp) protein (334aa)
GCN5-related N-acetyltransferase Tax=uncultured candidate division OP1 bacterium RepID=H5SL20_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:BAL56856.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
N-acetyltransferase GCN5
PLM1_100_b1_sep16_scaffold_117_29
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

26697..27815
DNA (1119bp) protein (373aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN37_MARHT
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM1_100_b1_sep16_scaffold_117_30
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(27830..29020)
DNA (1191bp) protein (397aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Z7_CONWI
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
Displaying items 1-30 of 240 in total

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