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PLM1_100_b1_sep16_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_119_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..620
DNA (618bp) protein (206aa)
YD repeat-containing protein Tax=Haloferax prahovense DSM 18310 RepID=M0GC94_9EURY
YD repeat-containing protein {ECO:0000313|EMBL:ELZ69183.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
probable cell surface glycoprotein
PLM1_100_b1_sep16_scaffold_119_2
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(684..1475)
DNA (792bp) protein (264aa)
Transcriptional regulator, TrmB Tax=Ferroplasma sp. Type II RepID=T0NAB0_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EQB74074.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
transcriptional regulator TrmB
PLM1_100_b1_sep16_scaffold_119_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1538..2269
DNA (732bp) protein (244aa)
Methyltransferase type 11 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K282_DEHLB
methyltransferase type 11
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2417..2947
DNA (531bp) protein (177aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI00037C9A40
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_5

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comp(2944..3567)
DNA (624bp) protein (208aa)
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EQD54179.1}; EC=2.1.1.100 {ECO:0000313|EMBL:EQD54179.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Isoprenylcysteine carboxyl methyltransferase Tax=mine drainage metagenome RepID=T1BLM1_9ZZZZ
phospholipid methyltransferase protein
PLM1_100_b1_sep16_scaffold_119_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3606..4532)
DNA (927bp) protein (309aa)
Putative dihydrodipicolinate reductase domain protein Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3W115_9LEPT
putative nucleoside-diphosphate sugar epimerase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4590..5708)
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_119_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5710..6000)
DNA (291bp) protein (97aa)
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein; K11996 adenylyltransferase and sulfurtransferase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6030..6626)
DNA (597bp) protein (199aa)
Methyltransferase type 11 Tax=Methanofollis liminatans DSM 4140 RepID=J0SCC0_9EURY
methyltransferase type 11
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6699..7121
DNA (423bp) protein (141aa)
HxlR family transcriptional regulator Tax=Natrialba aegyptia DSM 13077 RepID=M0AMJ5_9EURY
HxlR family transcriptional regulator
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7175..9115
DNA (1941bp) protein (647aa)
DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF512
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_119_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9116..9619)
DNA (504bp) protein (168aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI000381BA2B
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM1_100_b1_sep16_scaffold_119_13
unknown

Not on your lists

comp(9632..9832)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_119_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


9901..10356
DNA (456bp) protein (152aa)
30S ribosomal protein S15 Tax=Euryarchaeota RepID=M9SF11_9EURY
SSU ribosomal protein S13e (S15p)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10367..11734
DNA (1368bp) protein (456aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000362F589
putative single-stranded-DNA-specific exonuclease
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(11731..12435)
DNA (705bp) protein (235aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_119_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12501..13061)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13101..14324)
DNA (1224bp) protein (408aa)
ORC1-type DNA replication protein Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Z6_9EURY
cdc62; ORC1-type DNA replication protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14334..14726
DNA (393bp) protein (131aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_20
unknown

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14830..15282
DNA (453bp) protein (151aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_119_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15454..16995
DNA (1542bp) protein (514aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16992..17549)
DNA (558bp) protein (186aa)
Putative transcriptional regulator Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4Z8_METCZ
transcriptional regulator
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_23
unknown

Not on your lists

17578..18444
DNA (867bp) protein (289aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_119_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

18469..19416
DNA (948bp) protein (316aa)
deoxyhypusine synthase (EC:2.5.1.46)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036405EB
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(19445..19663)
DNA (219bp) protein (73aa)
transcriptional regulator Tax=Thermoplasma acidophilum RepID=UPI00001660FF
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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19735..20271
DNA (537bp) protein (179aa)
NUDIX hydrolase Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CN76_SYNLT
NUDIX hydrolase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_27
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(20275..20697)
DNA (423bp) protein (141aa)
Protein containing DUF1801 Tax=mine drainage metagenome RepID=T0Z418_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM1_100_b1_sep16_scaffold_119_28
Mesotoga infera, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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20869..23688
DNA (2820bp) protein (940aa)
von Willebrand factor type A Tax=Mesotoga sp. PhosAc3 RepID=N1JMN8_9THEM
von Willebrand factor type A {ECO:0000313|EMBL:CCU84367.1}; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga infera.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_119_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

23837..24154
DNA (318bp) protein (106aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C086D
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_119_30
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

24231..25271
DNA (1041bp) protein (347aa)
Cell division protein FtsZ Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P663_METFA
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 157 in total

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