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PLM1_100_b1_sep16_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_282_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2..925
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon A-plasma RepID=T0LS46_9EURY
peptide ABC transporter substrate-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_2
unknown

Not on your lists

915..1346
DNA (432bp) protein (144aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_282_3
unknown

Not on your lists

1373..2152
DNA (780bp) protein (260aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_282_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2246..3316
DNA (1071bp) protein (357aa)
Cell division protein FtsZ Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP81_ACIS0
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(3363..3809)
DNA (447bp) protein (149aa)
Glyoxalase/bleomycin resistance protein/dioxygenase domain protein (Fragment) Tax=mine drainage metagenome RepID=T0ZAT8_9ZZZZ
Tax=RBG_16_Archaea_50_20_curated
PLM1_100_b1_sep16_scaffold_282_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3922..4173
DNA (252bp) protein (84aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4212..5537)
DNA (1326bp) protein (442aa)
alkylglycerone-phosphate synthase (EC:2.5.1.26)
Putative FAD binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_282_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

5798..6910
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6912..7151
DNA (240bp) protein (80aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380AC36
secE; preprotein translocase subunit SecE
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


7165..8109
DNA (945bp) protein (315aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


8110..8592
DNA (483bp) protein (161aa)
50S ribosomal protein L11 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
50S ribosomal protein L11
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8608..9471)
DNA (864bp) protein (288aa)
Transcriptional regulator, TrmB Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQQ4_METZD
transcriptional regulator TrmB
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM1_100_b1_sep16_scaffold_282_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


9610..10254
DNA (645bp) protein (215aa)
50S ribosomal protein L1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
rpl1; 50S ribosomal protein L1
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


10265..11254
DNA (990bp) protein (330aa)
50S ribosomal protein L10 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V4_9EURY
rplP0; acidic ribosomal protein P0
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

11289..11603
DNA (315bp) protein (105aa)
50S ribosomal protein L12 Tax=unclassified Thermoplasmatales RepID=M7T3Z7_9EURY
rpl12p; 50S ribosomal protein L12
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11672..12001)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1BUM6_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12037..13053)
DNA (1017bp) protein (339aa)
TIGR01210 family protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJD4_ACIS0
TIGR01210 family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_282_18
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(13103..13519)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RW80_THEPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL77460.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
PLM1_100_b1_sep16_scaffold_282_19
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(13512..13751)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RW79_THEPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL77459.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
PLM1_100_b1_sep16_scaffold_282_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(13795..15321)
DNA (1527bp) protein (509aa)
Cysteine-rich domain protein Tax=Corynebacterium accolens ATCC 49725 RepID=C0WGM5_9CORY
filamentous hemagglutinin family outer membrane protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_trna_1
unknown

Not on your lists

15849..15920
DNA (72bp)
transferRNA Thr
PLM1_100_b1_sep16_scaffold_282_21
unknown

Not on your lists

comp(15924..16064)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_282_22
unknown

Not on your lists

comp(16077..16373)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_282_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16472..16945
DNA (474bp) protein (158aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003638EAB
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

16953..17411
DNA (459bp) protein (153aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17412..17900
DNA (489bp) protein (163aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17905..19185)
DNA (1281bp) protein (427aa)
Glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGV2_ACIB4
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(19265..20461)
DNA (1197bp) protein (399aa)
Methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICM2_ACIB4
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_282_28
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20630..21217
DNA (588bp) protein (196aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F6670
transcription regulator
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_282_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21223..22131)
DNA (909bp) protein (303aa)
ribonuclease Z (EC:3.1.26.11)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000372EA3B
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 142 in total

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