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PLM1_100_b1_sep16_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_303_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..596)
DNA (594bp) protein (198aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZZ4_9EURY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(672..4928)
DNA (4257bp) protein (1419aa)
Putative protease Tax=Cellvibrio sp. BR RepID=I3I6E9_9GAMM
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM1_100_b1_sep16_scaffold_303_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(5012..5548)
DNA (537bp) protein (179aa)
Putative uncharacterized protein PH0578 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58339_PYRHO
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5675..6334)
DNA (660bp) protein (220aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5STK0_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

6555..6884
DNA (330bp) protein (110aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_303_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6940..7683
DNA (744bp) protein (248aa)
DNA alkylation repair enzyme bin=GWC2_CP_Nitrospirae-rel_42_7 species=Brevibacterium linens genus=Brevibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_7
unknown

Not on your lists

comp(7680..7985)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8033..8425
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T4H5_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8430..9419
DNA (990bp) protein (330aa)
Putative exonuclease of the beta-lactamase fold involved in RNA processing Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P446_CYAGP
exonuclease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9416..9865
DNA (450bp) protein (150aa)
DNA-binding protein Tax=mine drainage metagenome RepID=T0ZJG7_9ZZZZ
DNA-binding protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9795..10916)
DNA (1122bp) protein (374aa)
Arabinose efflux permease family protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYZ0_METHD
arabinose efflux permease family protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10959..11168)
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T931_ACIB4
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_13
unknown

Not on your lists

comp(11223..11510)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_14
unknown

Not on your lists

comp(11522..11698)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11854..13245
DNA (1392bp) protein (464aa)
Uncharacterized protein Tax=Cyanothece RepID=B1WP97_CYAA5
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_16
unknown

Not on your lists

13308..13484
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13514..14086
DNA (573bp) protein (191aa)
Transcriptional regulator, ArsR family Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN89_ARCVS
ArsR family transcriptional regulator
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14174..14491)
DNA (318bp) protein (106aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14488..14976)
DNA (489bp) protein (163aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_20
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15181..15576)
DNA (396bp) protein (132aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nucleotide-binding protein, PIN domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM1_100_b1_sep16_scaffold_303_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(15590..15832)
DNA (243bp) protein (81aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15887..17164)
DNA (1278bp) protein (426aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.-)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000362D43A
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_23
unknown

Not on your lists

comp(17204..17947)
DNA (744bp) protein (248aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_24
unknown

Not on your lists

18076..18531
DNA (456bp) protein (152aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_25
unknown

Not on your lists

18531..18701
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(18716..18994)
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E0DF2
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM1_100_b1_sep16_scaffold_303_27
unknown

Not on your lists

comp(19051..19827)
DNA (777bp) protein (259aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_28
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19979..20875
DNA (897bp) protein (299aa)
DsbA oxidoreductase Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N707_9ARCH
DsbA oxidoreductase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_303_29
unknown

Not on your lists

20994..21404
DNA (411bp) protein (137aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_303_30
unknown

Not on your lists

comp(21401..21517)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying items 1-30 of 47 in total

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