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PLM1_100_b1_sep16_scaffold_5374

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_5374_1
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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353..1363
-----------------
DNA (1011bp)
protein (337aa)
Phosphate acyltransferase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y946_THEBD
fatty acid/phospholipid synthesis protein PlsX
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_5374_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1420..1665
-----------------
DNA (246bp)
protein (82aa)
acyl carrier protein Tax=Cohnella laeviribosi RepID=UPI00037448A5
acyl carrier proteins
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_b1_sep16_scaffold_5374_3
unknown

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comp(1589..2206)
-----------------
DNA (618bp)
protein (206aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_5374_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2371..4512
-----------------
DNA (2142bp)
protein (714aa)
Chromosome partition protein Smc bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_5374_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4509..5471
-----------------
DNA (963bp)
protein (321aa)
Signal recognition particle receptor FtsY Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1E0_CONWI
signal recognition particle-docking protein FtsY
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_5374_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5464..5910
-----------------
DNA (447bp)
protein (149aa)
Short-chain dehydrogenase/reductase SDR Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9M4_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB51086.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_5374_7

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5862..6077
-----------------
DNA (216bp)
protein (72aa)
short-chain dehydrogenase Tax=Patulibacter americanus RepID=UPI0003B57AA6
short-chain dehydrogenase/reductase SDR
Uncharacterized protein {ECO:0000313|EMBL:KKN47481.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM1_100_b1_sep16_scaffold_5374_8
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(6074..6283)
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000377BE60
hypothetical protein
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
PLM1_100_b1_sep16_scaffold_5374_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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6345..7676
-----------------
DNA (1332bp)
protein (444aa)
signal recognition particle protein Srp54 Tax=Orenia marismortui RepID=UPI00037C5758
signal recognition particle protein Srp54
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_5374_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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7702..7980
-----------------
DNA (279bp)
protein (93aa)
30S ribosomal protein S16 Tax=Selenomonas RepID=C9LTV9_SELS3
ribosomal protein S16
Tax=CG_Solirubrobact_01
PLM1_100_b1_sep16_scaffold_5374_11
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8047..8223
-----------------
DNA (177bp)
protein (59aa)
UPF0109 protein SELR_14940 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GR15_SELRL
hypothetical protein
UPF0109 protein SELR_14940 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
PLM1_100_b1_sep16_scaffold_5374_12
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8352..8837
-----------------
DNA (486bp)
protein (162aa)
Ribosome maturation factor RimM Tax=Selenomonas noxia F0398 RepID=G5H2D6_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia F0398.;"
rimM; 16S rRNA processing protein RimM
PLM1_100_b1_sep16_scaffold_5374_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8854..9552
-----------------
DNA (699bp)
protein (233aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D3_CONWI
PLM1_100_b1_sep16_scaffold_5374_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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9549..10148
-----------------
DNA (600bp)
protein (200aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L3B8_9BACT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_5374_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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10222..10563
-----------------
DNA (342bp)
protein (114aa)
50S ribosomal protein L19 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1D2_CONWI
50S ribosomal protein L19
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 15 items

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