name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM1_100_b1_sep16_scaffold_5722_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria
|
Not on your lists |
comp(1..615)
----------------- DNA (615bp) protein (205aa) |
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
tRNA pseudouridine synthase A Tax=Patulibacter medicamentivorans RepID=H0E8R9_9ACTN
tRNA pseudouridine(38-40) synthase
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PLM1_100_b1_sep16_scaffold_5722_2
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
641..970
----------------- DNA (330bp) protein (110aa) |
Putative transcriptional regulatory protein, Ars family Tax=Bradyrhizobium sp. STM 3809 RepID=H0T614_9BRAD
Putative transcriptional regulatory protein, Ars family {ECO:0000313|EMBL:CCE01891.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
putative transcriptional regulatory protein, Ars family
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PLM1_100_b1_sep16_scaffold_5722_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea
|
Not on your lists |
984..1430
----------------- DNA (447bp) protein (149aa) |
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037336DB
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
|
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PLM1_100_b1_sep16_scaffold_5722_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(1438..1830)
----------------- DNA (393bp) protein (131aa) |
50S ribosomal protein L17 Tax=Amorphus coralli RepID=UPI0003796409
50S ribosomal protein L17
Tax=RBG_16_Actinobacteria_64_13_curated
|
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PLM1_100_b1_sep16_scaffold_5722_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria
|
Not on your lists |
comp(1834..2790)
----------------- DNA (957bp) protein (319aa) |
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA-directed RNA polymerase subunit alpha Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS1_CONWI
DNA-directed RNA polymerase subunit alpha
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PLM1_100_b1_sep16_scaffold_5722_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
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Not on your lists |
comp(2832..3452)
----------------- DNA (621bp) protein (207aa) |
30S ribosomal protein S4 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS74_KYRT2
30S ribosomal protein S4
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(3452..3856)
----------------- DNA (405bp) protein (135aa) |
30S ribosomal protein S11 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS0_CONWI
30S ribosomal protein S11
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
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Not on your lists |
comp(3857..4240)
----------------- DNA (384bp) protein (128aa) |
30S ribosomal protein S13 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYC3_9FIRM
30S ribosomal protein S13
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(4388..5152)
----------------- DNA (765bp) protein (255aa) |
Methionine aminopeptidase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR7_CONWI
methionine aminopeptidase
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(5149..5733)
----------------- DNA (585bp) protein (195aa) |
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain PCC 7418) (Synechococcus sp. (strain PCC 7418)).;"
Adenylate kinase Tax=Halothece sp. (strain PCC 7418) RepID=K9YGR4_HALP7
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PLM1_100_b1_sep16_scaffold_5722_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria
|
Not on your lists |
comp(5763..6785)
----------------- DNA (1023bp) protein (341aa) |
preprotein translocase subunit SecY Tax=Patulibacter americanus RepID=UPI0003B4E342
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
preprotein translocase subunit SecY
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PLM1_100_b1_sep16_scaffold_5722_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria
|
Not on your lists |
comp(6859..7524)
----------------- DNA (666bp) protein (222aa) |
50S ribosomal protein L15 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR4_CONWI
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
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PLM1_100_b1_sep16_scaffold_5722_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(7524..7703)
----------------- DNA (180bp) protein (60aa) |
50S ribosomal protein L30 bin=GWF2_Bacteroidetes_42_66 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
50S ribosomal protein L30
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria
|
Not on your lists |
comp(7672..8256)
----------------- DNA (585bp) protein (195aa) |
30S ribosomal protein S5 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEW2_CONWI
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
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PLM1_100_b1_sep16_scaffold_5722_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(8423..8779)
----------------- DNA (357bp) protein (119aa) |
50S ribosomal protein L18 Tax=Streptococcus merionis RepID=UPI0003702BFA
rplR; 50S ribosomal protein L18
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(8783..9316)
----------------- DNA (534bp) protein (178aa) |
50S ribosomal protein L6 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEW0_CONWI
50S ribosomal protein L6
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(9354..9749)
----------------- DNA (396bp) protein (132aa) |
30S ribosomal protein S8 Tax=Nesterenkonia alba RepID=UPI0003B67E77
30S ribosomal protein S8
Tax=RBG_16_Actinobacteria_68_12_curated
|
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PLM1_100_b1_sep16_scaffold_5722_18
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(9752..9937)
----------------- DNA (186bp) protein (62aa) |
30S ribosomal protein S14 type Z Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A2N2_STRMB
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
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PLM1_100_b1_sep16_scaffold_5722_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(9949..10566)
----------------- DNA (618bp) protein (206aa) |
50S ribosomal protein L5 bin=GWF1_Spirochaetes_51_8 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
50S ribosomal protein L5
Tax=RBG_16_Actinobacteria_68_12_curated
|
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PLM1_100_b1_sep16_scaffold_5722_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(10566..10937)
----------------- DNA (372bp) protein (124aa) |
50S ribosomal protein L24 Tax=Thermotoga sp. EMP RepID=J9H050_9THEM
rplX; 50S ribosomal protein L24
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(10940..11308)
----------------- DNA (369bp) protein (123aa) |
50S ribosomal protein L14 Tax=Patulibacter medicamentivorans RepID=H0E8Q0_9ACTN
50S ribosomal protein L14
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(11316..12218)
----------------- DNA (903bp) protein (301aa) |
PT repeat family protein (Fragment) Tax=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) RepID=V5FJ52_BYSSN
DEAD/DEAH box helicase
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_23
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(12222..12431)
----------------- DNA (210bp) protein (70aa) |
50S ribosomal protein L29 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKZ2_THEM7
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
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PLM1_100_b1_sep16_scaffold_5722_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria
|
Not on your lists |
comp(12415..12846)
----------------- DNA (432bp) protein (144aa) |
50S ribosomal protein L16 Tax=Thermincola potens (strain JR) RepID=D5XA90_THEPJ
50S ribosomal protein L16
Tax=RBG_16_Actinobacteria_68_12_curated
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PLM1_100_b1_sep16_scaffold_5722_25
unknown
|
Not on your lists |
comp(12846..12995)
----------------- DNA (150bp) protein (50aa) |
This feature has no annotations |