ggKbase home page

PLM1_100_b1_sep16_scaffold_6643

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_6643_1
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..810
-----------------
DNA (810bp)
protein (270aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0E3_CONWI
glutamyl-tRNA(Gln) amidotransferase subunit alpha
Tax=CG_Solirubrobact_01
PLM1_100_b1_sep16_scaffold_6643_2
unknown

Not on your lists

894..1106
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6643_3
unknown

Not on your lists

1103..1198
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6643_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1195..2607
-----------------
DNA (1413bp)
protein (471aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0E2_CONWI
glutamyl-tRNA(Gln) amidotransferase subunit B
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_6643_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2777..3418
-----------------
DNA (642bp)
protein (214aa)
RhtB family transporter Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XX30_ALCXX
RhtB family transporter {ECO:0000313|EMBL:EZQ17557.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
RhtB family transporter
PLM1_100_b1_sep16_scaffold_6643_6
unknown

Not on your lists

3635..4525
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_6643_7
SAR86 cluster bacterium SAR86A, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4575..5129)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI0003619974
Putative secreted protein {ECO:0000313|EMBL:EJP71119.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; SAR86 cluster.;" source="SAR86 cluster bacterium SAR86A.;"
LVIVD repeat-containing protein
PLM1_100_b1_sep16_scaffold_6643_8
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5129..6154)
-----------------
DNA (1026bp)
protein (342aa)
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI0003490834
LVIVD repeat family protein
LVIVD repeat family protein {ECO:0000313|EMBL:AFR06399.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
PLM1_100_b1_sep16_scaffold_6643_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6265..6903)
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_6643_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6927..8063
-----------------
DNA (1137bp)
protein (379aa)
phosphoserine aminotransferase/L-aspartate aminotransferase (EC:2.6.1.1 2.6.1.52)
Phosphoserine aminotransferase / L-aspartate aminotransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS4_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_6643_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

8060..8347
-----------------
DNA (288bp)
protein (96aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ABG03805.1}; EC=1.1.1.95 {ECO:0000313|EMBL:ABG03805.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
D-3-phosphoglycerate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS3_RUBXD
Displaying 11 items

View Taxonomy