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PLM1_100_b1_sep16_scaffold_4157

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4157_1
unknown

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comp(3..1877)
-----------------
DNA (1875bp)
protein (625aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_4157_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1883..2362)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein Tax=Kocuria sp. UCD-OTCP RepID=UPI00036CA0A3
TadE family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_4157_3
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2519..2683)
-----------------
DNA (165bp)
protein (55aa)
Flp/Fap pilin protein Tax=Dehalobacter sp. FTH1 RepID=UPI00037BC9D0
Flp/Fap pilin protein
Flp/Fap pilin protein {ECO:0000313|EMBL:AHF09668.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
PLM1_100_b1_sep16_scaffold_4157_4
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2885..3049)
-----------------
DNA (165bp)
protein (55aa)
Flp/Fap pilin protein Tax=Dehalobacter sp. FTH1 RepID=UPI00037BC9D0
Flp/Fap pilin protein
Flp/Fap pilin protein {ECO:0000313|EMBL:AHF09668.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
PLM1_100_b1_sep16_scaffold_4157_5

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3212..4639
-----------------
DNA (1428bp)
protein (476aa)
Peptidase M23B Tax=Patulibacter medicamentivorans RepID=H0E5Y5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKK66932.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cadherin
PLM1_100_b1_sep16_scaffold_4157_6

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4652..4993
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGA6_THET1
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_C00819 {ECO:0000313|EMBL:GAF82997.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM1_100_b1_sep16_scaffold_4157_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(4986..5555)
-----------------
DNA (570bp)
protein (190aa)
Leader peptidase (Prepilin peptidase) Tax=Patulibacter medicamentivorans RepID=H0EC51_9ACTN
peptidase A24A prepilin type IV
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_4157_8
unknown

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comp(5552..5959)
-----------------
DNA (408bp)
protein (136aa)
response regulator receiver sensor hybrid histidine kinase
PLM1_100_b1_sep16_scaffold_4157_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(6063..6695)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein Tax=Bacillus cereus AND1407 RepID=J7XIX3_BACCE
LuxR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 9 items

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