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PLM1_100_b1_sep16_scaffold_4990

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_4990_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2..574)
-----------------
DNA (573bp)
protein (191aa)
ABC transporter related protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YAJ0_THEBD
ABC transporter-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_4990_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(571..1404)
-----------------
DNA (834bp)
protein (278aa)
Glutamine ABC transporter, permease protein, putative Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BED3_STRRD
glutamine ABC transporter permease
Glutamine ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACZ91970.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_4990_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1415..2278)
-----------------
DNA (864bp)
protein (288aa)
Amino acid ABC transporter substrate-binding protein, PAAT family Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQI5_NOCSJ
extracellular solute-binding protein
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:ABL84070.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_100_b1_sep16_scaffold_4990_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2551..3711
-----------------
DNA (1161bp)
protein (387aa)
HtrA protease/chaperone protein Tax=Patulibacter medicamentivorans RepID=H0E1U9_9ACTN
peptidase S1 and S6 chymotrypsin/Hap
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_4990_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3806..4897
-----------------
DNA (1092bp)
protein (364aa)
Putative glutamate--cysteine ligase 2-3 {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2-3 {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS 2-3 {ECO:0000255|HAMAP-Rule:MF_01609};; Short=Gamma-GCS 2-3 {ECO:0000255|HAMAP-Rule:MF_01609};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Carboxylate-amine ligase Rxyl_1350 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=CAAL2_RUBXD
carboxylate-amine ligase
PLM1_100_b1_sep16_scaffold_4990_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4907..5128
-----------------
DNA (222bp)
protein (74aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_4990_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5154..5735
-----------------
DNA (582bp)
protein (194aa)
RNA polymerase sigma factor Tax=Nitrolancetus hollandicus Lb RepID=I4EEG4_9CHLR
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, TIGR02947 family
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_4990_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5741..5971
-----------------
DNA (231bp)
protein (77aa)
rsrA; mycothiol system anti-sigma-R factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_4990_9
unknown

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comp(5974..6063)
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

Displaying 9 items

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