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PLM1_100_b1_sep16_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_225_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

108..1052
-----------------
DNA (945bp)
protein (315aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_225_2
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1240..3864)
-----------------
DNA (2625bp)
protein (875aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
pyruvate phosphate dikinase Tax=Serinicoccus marinus RepID=UPI0003B5AE99
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_225_3
unknown

Not on your lists

comp(4011..4160)
-----------------
DNA (150bp)
protein (50aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_225_4
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4157..4993)
-----------------
DNA (837bp)
protein (279aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
Putative pyruvate, phosphate dikinase regulatory protein Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XNA8_PROPF
hypothetical protein
PLM1_100_b1_sep16_scaffold_225_5
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4995..6911)
-----------------
DNA (1917bp)
protein (639aa)
glyS; glycyl-tRNA synthetase subunit beta GlyS (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFT2_THEPS
Tax=S_Thermoanaerobacterales_50_218
PLM1_100_b1_sep16_scaffold_225_6
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6892..7761)
-----------------
DNA (870bp)
protein (290aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycyl-tRNA synthetase alpha chain Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A68_DECAR
Tax=BJP_IG2103_Dechloromonas_60_92
PLM1_100_b1_sep16_scaffold_225_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7758..8561)
-----------------
DNA (804bp)
protein (268aa)
DNA repair protein RecO Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD10_CONWI
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_225_8
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8601..8852
-----------------
DNA (252bp)
protein (84aa)
Glutaredoxin Tax=Coxiella burnetii RepID=A9KF83_COXBN
grxC; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AAO91017.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella.;" source="Coxiella burnetii (strain RSA 493 / Nine Mile phase I).;"
PLM1_100_b1_sep16_scaffold_225_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8849..9880)
-----------------
DNA (1032bp)
protein (344aa)
Putative esterase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP15_9CHLR
Putative esterase {ECO:0000313|EMBL:EFH85551.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
esterase
PLM1_100_b1_sep16_scaffold_225_10
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9891..10730)
-----------------
DNA (840bp)
protein (280aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S2K7_9RHOB
PLM1_100_b1_sep16_scaffold_225_11
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10746..12041)
-----------------
DNA (1296bp)
protein (432aa)
Pyrimidine-nucleoside phosphorylase Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EE13_THECK
pyrimidine-nucleoside phosphorylase
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:AGA58057.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
PLM1_100_b1_sep16_scaffold_225_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12038..12757)
-----------------
DNA (720bp)
protein (240aa)
Methyltransferase type 11 Tax=Nocardioides sp. CF8 RepID=R7Y0G3_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:EON25107.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
MerR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_225_13
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12754..13905)
-----------------
DNA (1152bp)
protein (384aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0B6_9FIRM
PLM1_100_b1_sep16_scaffold_225_14
unknown

Not on your lists

13940..14080
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_225_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14077..15198)
-----------------
DNA (1122bp)
protein (374aa)
alanine dehydrogenase Tax=Halomonas smyrnensis RepID=UPI0002F5EFD2
L-alanine dehydrogenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_225_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15235..16218)
-----------------
DNA (984bp)
protein (328aa)
Putative uncharacterized protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW20_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG04408.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_225_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16202..17314)
-----------------
DNA (1113bp)
protein (371aa)
Peptidase dimerization domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ4_CONWI
peptidase dimerization domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_225_18
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17335..18981)
-----------------
DNA (1647bp)
protein (549aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=PYRG_CARHZ
Tax=RBG_13_Actinobacteria_63_9_curated
PLM1_100_b1_sep16_scaffold_225_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(18978..20138)
-----------------
DNA (1161bp)
protein (387aa)
Glycosyl transferase family 2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F029_CONWI
family 2 glycosyl transferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_225_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20182..21105)
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51503.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_225_21
unknown

Not on your lists

comp(21132..21557)
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_225_22
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21554..22687)
-----------------
DNA (1134bp)
protein (378aa)
Thiamin pyrophosphokinase catalytic region Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ0_CONWI
Thiamin pyrophosphokinase catalytic region
Tax=CG_Solirubrobact_01
PLM1_100_b1_sep16_scaffold_225_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22694..24340)
-----------------
DNA (1647bp)
protein (549aa)
DNA repair protein RecN Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY9_CONWI
DNA repair protein RecN
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_225_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(24345..25172)
-----------------
DNA (828bp)
protein (276aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Patulibacter medicamentivorans RepID=H0E4V0_9ACTN
ATP-NAD/AcoX kinase
PLM1_100_b1_sep16_scaffold_225_25
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(25126..25860)
-----------------
DNA (735bp)
protein (245aa)
Hemolysin A Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKS1_THEM7
hemolysin A
Tax=RBG_16_Acidobacteria_64_8_curated
PLM1_100_b1_sep16_scaffold_225_26
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25877..27103)
-----------------
DNA (1227bp)
protein (409aa)
putative adenylate/guanylate cyclase (EC:4.6.1.2)
hypothetical protein Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C15D7
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJL48578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
PLM1_100_b1_sep16_scaffold_225_27
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27100..28305)
-----------------
DNA (1206bp)
protein (402aa)
putative adenylate/guanylate cyclase (EC:4.6.1.2)
Family 3 adenylate cyclase Tax=Rhizobium sp. CF122 RepID=J2IIS8_9RHIZ
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJL48578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
PLM1_100_b1_sep16_scaffold_225_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(28305..29144)
-----------------
DNA (840bp)
protein (280aa)
Polyprenyl synthetase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY2_CONWI
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ADB51494.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_225_29
unknown

Not on your lists

comp(29131..29325)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_225_30
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(29312..29701)
-----------------
DNA (390bp)
protein (130aa)
N utilization substance protein B homolog Tax=Patulibacter medicamentivorans RepID=H0E4U3_9ACTN
NusB antitermination factor
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying items 1-30 of 31 in total

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