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PLM1_100_b1_sep16_scaffold_424

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_424_1
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3..569
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein Tax=Salinispora tropica RepID=UPI000379567E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB43021.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_424_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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581..2041
-----------------
DNA (1461bp)
protein (487aa)
Aldehyde dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXK7_RUBXD
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABG03871.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_424_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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2045..3193
-----------------
DNA (1149bp)
protein (383aa)
major facilitator transporter bin=bin8_Chloro species=Streptomyces scabrisporus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
major facilitator transporter
Tax=CSP1_4_Chloroflexi
PLM1_100_b1_sep16_scaffold_424_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(3117..4502)
-----------------
DNA (1386bp)
protein (462aa)
Amidophosphoribosyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXB5_RUBXD
purF: amidophosphoribosyltransferase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_424_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4502..6577)
-----------------
DNA (2076bp)
protein (692aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAI6_CONWI
PLM1_100_b1_sep16_scaffold_424_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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6660..7571
-----------------
DNA (912bp)
protein (304aa)
hypothetical protein Tax=Thiothrix flexilis RepID=UPI00036D3829
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_424_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7568..8095
-----------------
DNA (528bp)
protein (176aa)
Aminoglycoside 6'-N-acetyltransferase Tax=uncultured bacterium RepID=F8UVN1_9BACT
aminoglycoside 6'-N-acetyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_424_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8095..8466
-----------------
DNA (372bp)
protein (124aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:EHN10901.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EHN10901.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Lactoylglutathione lyase Tax=Patulibacter medicamentivorans RepID=H0E607_9ACTN
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_100_b1_sep16_scaffold_424_9
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8469..8879
-----------------
DNA (411bp)
protein (137aa)
Uncharacterized protein Tax=Rhodococcus sp. EsD8 RepID=N1M4J2_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:CCW10223.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
PLM1_100_b1_sep16_scaffold_424_10
unknown

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8930..9187
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_424_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9189..9875)
-----------------
DNA (687bp)
protein (229aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphoribosylformylglycinamidine synthase 1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAI5_CONWI
PLM1_100_b1_sep16_scaffold_424_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9868..10110)
-----------------
DNA (243bp)
protein (81aa)
Methyl-accepting chemotaxis sensory transducer protein Tax=alpha proteobacterium RS24 RepID=U2W931_9PROT
phosphoribosylformylglycinamidine synthase subunit PurS
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_424_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10107..10970)
-----------------
DNA (864bp)
protein (288aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Frankia sp. QA3 RepID=I9KLS1_9ACTO
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_424_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10963..12255)
-----------------
DNA (1293bp)
protein (431aa)
Adenylosuccinate lyase Tax=uncultured Acidobacteria bacterium RepID=H5SIT3_9BACT
adenylosuccinate lyase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_424_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12326..12742)
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WP03_9NOCA
glyoxalase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_424_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12747..13247)
-----------------
DNA (501bp)
protein (167aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAH2_CONWI
PLM1_100_b1_sep16_scaffold_424_17
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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comp(13234..14784)
-----------------
DNA (1551bp)
protein (517aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
Phosphoribosylamine--glycine ligase Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T214_THEA1
phosphoribosylamine/glycine ligase
PLM1_100_b1_sep16_scaffold_424_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14929..16413
-----------------
DNA (1485bp)
protein (495aa)
Glutamine synthetase-like protein Tax=alpha proteobacterium HIMB5 RepID=J9YXA6_9PROT
glutamine synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_424_19

Not on your lists

16418..17350
-----------------
DNA (933bp)
protein (311aa)
Glutamate synthase domain 1 Tax=uncultured bacterium HF770_09N20 RepID=E0XPR2_9BACT
Glutamate synthase domain 1 {ECO:0000313|EMBL:ADI16403.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium HF770_09N20.;"
glutamine amidotransferase protein GlxB
PLM1_100_b1_sep16_scaffold_424_20
RLO_PLX_64_10, Bacteria

Not on your lists

17496..18293
-----------------
DNA (798bp)
protein (266aa)
GXGXG motif-containing protein Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=UPI0003788C8C
GXGXG motif-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_424_21
RLO_PLX_64_10, Bacteria

Not on your lists

18460..19899
-----------------
DNA (1440bp)
protein (480aa)
glutamate synthase [NADPH] large chain (EC:1.4.1.13)
glutamate synthase Tax=alpha proteobacterium SCGC AAA298-K06 RepID=UPI00036AA8B5
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_424_22
unknown

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19896..20327
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_424_23
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20502..21890
-----------------
DNA (1389bp)
protein (463aa)
nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9)
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:ABG03727.1}; EC=1.2.1.9 {ECO:0000313|EMBL:ABG03727.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY01_RUBXD
Displaying 23 items

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