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PLM1_100_b1_sep16_scaffold_520

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_520_1
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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61..1275
-----------------
DNA (1215bp)
protein (405aa)
Putative metal cation transporter Tax=Frankia sp. (strain CcI3) RepID=Q2JA13_FRASC
metal cation transporter
Putative divalent heavy-metal cations transporter {ECO:0000313|EMBL:KDA41494.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM1_100_b1_sep16_scaffold_520_2
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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1388..2521
-----------------
DNA (1134bp)
protein (378aa)
Uncharacterized protein Tax=Amphimedon queenslandica RepID=I1GDC6_AMPQE
hypothetical protein
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15726416}; species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
PLM1_100_b1_sep16_scaffold_520_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2518..3192)
-----------------
DNA (675bp)
protein (225aa)
MJ0042 family finger-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4L9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_520_4
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3580..4881
-----------------
DNA (1302bp)
protein (434aa)
regulatory protein Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003655B42
Regulatory protein {ECO:0000313|EMBL:EGG48503.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
regulatory protein
PLM1_100_b1_sep16_scaffold_520_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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5152..7542
-----------------
DNA (2391bp)
protein (797aa)
Helicase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F301_CONWI
helicase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_520_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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7605..8441
-----------------
DNA (837bp)
protein (279aa)
Transcriptional regulator, GntR Tax=Geobacillus thermoleovorans CCB_US3_UF5 RepID=G8N0H5_GEOTH
transcriptional regulator, GntR
Tax=CG_Anaero_02
PLM1_100_b1_sep16_scaffold_520_7
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8503..9192
-----------------
DNA (690bp)
protein (230aa)
Creatinine amidohydrolase family protein Tax=Mycobacterium hassiacum DSM 44199 RepID=K5B9U4_9MYCO
Creatinine amidohydrolase family protein {ECO:0000313|EMBL:EKF21095.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
creatininase
PLM1_100_b1_sep16_scaffold_520_8
unknown

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comp(9189..9755)
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_520_9
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9772..10275)
-----------------
DNA (504bp)
protein (168aa)
PPOX class probable F420-dependent enzyme Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RMF8_MYCRN
PPOX class F420-dependent protein
PPOX class probable F420-dependent enzyme {ECO:0000313|EMBL:AEV72455.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM1_100_b1_sep16_scaffold_520_10

Not on your lists

comp(10236..11003)
-----------------
DNA (768bp)
protein (256aa)
Marine sediment metagenome DNA, contig: S01H4_C02314 {ECO:0000313|EMBL:GAG59662.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
PLM1_100_b1_sep16_scaffold_520_11
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11000..12271)
-----------------
DNA (1272bp)
protein (424aa)
UPI0003D6CF39 related cluster Tax=unknown RepID=UPI0003D6CF39
YahG/YlbE-like protein
YahG/YlbE-like protein {ECO:0000313|EMBL:AHD24141.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
PLM1_100_b1_sep16_scaffold_520_12
RLO_PLX_64_10, Bacteria

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comp(12252..12761)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3D839
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_520_13
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(12947..14560)
-----------------
DNA (1614bp)
protein (538aa)
Amino acid permease-associated region Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFN9_ROSCS
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ABU56265.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM1_100_b1_sep16_scaffold_520_14
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(14576..15547)
-----------------
DNA (972bp)
protein (324aa)
hypothetical protein bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Ser/Thr protein phosphatase family protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM1_100_b1_sep16_scaffold_520_15
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15550..16932)
-----------------
DNA (1383bp)
protein (461aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0002ED04A6
Glutamine synthetase {ECO:0000313|EMBL:KIF16886.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
glutamine synthetase
PLM1_100_b1_sep16_scaffold_520_16
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17116..18270
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein Tax=Mycobacterium sp. 155 RepID=UPI00036E1D5F
Arginase/agmatinase/formiminoglutamase
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:ADG06720.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
PLM1_100_b1_sep16_scaffold_520_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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18270..18995
-----------------
DNA (726bp)
protein (242aa)
High-affinity nickel-transporter Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZT9_RUBXD
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ABG03089.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_520_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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19117..19971
-----------------
DNA (855bp)
protein (285aa)
thiol:disulfide interchange protein
cytochrome c biogenesis protein bin=CNBR_ACT species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 18 items

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