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PLM1_100_b1_sep16_scaffold_595

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_595_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..1740
-----------------
DNA (1740bp)
protein (580aa)
ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2 Tax=Patulibacter medicamentivorans RepID=H0E9X6_9ACTN
ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EHN09517.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ComE operon protein 3
PLM1_100_b1_sep16_scaffold_595_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1754..2734
-----------------
DNA (981bp)
protein (327aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABG04480.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABG04480.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
DNA polymerase III, delta subunit Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVU8_RUBXD
PLM1_100_b1_sep16_scaffold_595_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2720..2983)
-----------------
DNA (264bp)
protein (88aa)
30S ribosomal protein S20 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C333_SPHTD
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_100_b1_sep16_scaffold_595_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3057..4616
-----------------
DNA (1560bp)
protein (520aa)
Integral membrane protein MviN Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU2_CONWI
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_595_5

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4616..6406
-----------------
DNA (1791bp)
protein (597aa)
Elongation factor 4 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKM16804.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GTP-binding protein LepA
PLM1_100_b1_sep16_scaffold_595_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6441..7559
-----------------
DNA (1119bp)
protein (373aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00037E0D21
coproporphyrinogen III oxidase
Putative radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type {ECO:0000313|EMBL:AIY18121.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM1_100_b1_sep16_scaffold_595_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7569..8615
-----------------
DNA (1047bp)
protein (349aa)
Heat-inducible transcription repressor hrcA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU8_CONWI
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_595_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8804..9928
-----------------
DNA (1125bp)
protein (375aa)
Chaperone protein DnaJ Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU9_CONWI
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_595_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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9997..10692
-----------------
DNA (696bp)
protein (232aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribosomal protein L11 methyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV0_CONWI
ribosomal L11 methyltransferase
PLM1_100_b1_sep16_scaffold_595_10
unknown

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10709..11044
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_595_11
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11068..12267
-----------------
DNA (1200bp)
protein (400aa)
RNA modification enzyme, MiaB family Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMW3_DESK7
MiaB family RNA modification protein
RNA modification enzyme, MiaB family {ECO:0000313|EMBL:AEG16179.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM1_100_b1_sep16_scaffold_595_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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12305..12580
-----------------
DNA (276bp)
protein (92aa)
Histidine triad family protein Tax=Sulfurovum sp. AR RepID=I2K9E9_9PROT
HIT family hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_595_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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12577..13020
-----------------
DNA (444bp)
protein (148aa)
GatB/Yqey Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVV4_RUBXD
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_595_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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13160..14119
-----------------
DNA (960bp)
protein (320aa)
PhoH family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV5_CONWI
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ADB51268.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_595_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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14116..14490
-----------------
DNA (375bp)
protein (125aa)
heat-shock protein Tax=Patulibacter americanus RepID=UPI0003B31D57
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_595_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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14490..15209
-----------------
DNA (720bp)
protein (240aa)
Diacylglycerol kinase Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSK2_ALKMQ
diacylglycerol kinase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_595_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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15210..15572
-----------------
DNA (363bp)
protein (121aa)
cdd; Cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase Tax=Selenomonas noxia F0398 RepID=G5GZH3_9FIRM
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_595_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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15569..16435
-----------------
DNA (867bp)
protein (289aa)
GTPase Era Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV7_CONWI
GTP-binding protein Era
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_595_19
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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16441..17949
-----------------
DNA (1509bp)
protein (503aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF16_THET1
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM1_100_b1_sep16_scaffold_595_20
unknown

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18037..18477
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

Displaying 20 items

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