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PLM1_100_b1_sep16_scaffold_612

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_612_1
unknown

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67..369
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_612_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(366..2321)
-----------------
DNA (1956bp)
protein (652aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH 1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=FTSH1_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_612_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2389..2964)
-----------------
DNA (576bp)
protein (192aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
hypoxanthine phosphoribosyltransferase Tax=Patulibacter americanus RepID=UPI0003B760F5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_612_4

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comp(2961..4001)
-----------------
DNA (1041bp)
protein (347aa)
tRNA(Ile)-lysidine synthase {ECO:0000313|EMBL:AHG52928.1}; EC=6.3.4.19 {ECO:0000313|EMBL:AHG52928.1};; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
tRNA(Ile)-lysidine synthase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATZ7_RUBXD
tRNA(Ile)-lysidine synthetase-like protein
PLM1_100_b1_sep16_scaffold_612_5
unknown

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comp(4043..4507)
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_612_6

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comp(4563..5354)
-----------------
DNA (792bp)
protein (264aa)
N-acetyltransferase GCN5 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MIF9_9ACTO
Putative acetyltransferase {ECO:0000313|EMBL:AHG52931.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
GCN5 family acetyltransferase
PLM1_100_b1_sep16_scaffold_612_7

Not on your lists

5461..6168
-----------------
DNA (708bp)
protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000313|EMBL:AHG52932.1}; EC=2.4.2.1 {ECO:0000313|EMBL:AHG52932.1};; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Purine-nucleoside phosphorylase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYF1_RUBXD
Purine-nucleoside phosphorylase
PLM1_100_b1_sep16_scaffold_612_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6165..7079
-----------------
DNA (915bp)
protein (305aa)
Diacylglycerol kinase, catalytic region Tax=uncultured prokaryote RepID=H5SI45_9ZZZZ
diacylglycerol kinase catalytic subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_612_9
unknown

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comp(7099..7500)
-----------------
DNA (402bp)
protein (134aa)
NLP/P60 family secreted protein
PLM1_100_b1_sep16_scaffold_612_10
unknown

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comp(7533..8747)
-----------------
DNA (1215bp)
protein (405aa)
hypothetical protein Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3DFEF
PLM1_100_b1_sep16_scaffold_612_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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comp(8744..10510)
-----------------
DNA (1767bp)
protein (589aa)
Membrane protein-like protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM1_100_b1_sep16_scaffold_612_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10486..11394)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W779_UNCMA
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_612_13

Not on your lists

11425..11883
-----------------
DNA (459bp)
protein (153aa)
Acyl-CoA thioester hydrolase YbgC {ECO:0000313|EMBL:AHG52937.1}; EC=3.1.2.- {ECO:0000313|EMBL:AHG52937.1};; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A5L2_9ACTN
hypothetical protein
PLM1_100_b1_sep16_scaffold_612_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11880..13796)
-----------------
DNA (1917bp)
protein (639aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035C7972
VanW family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_612_15
unknown

Not on your lists

comp(13783..14676)
-----------------
DNA (894bp)
protein (298aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_612_16
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

14702..15913
-----------------
DNA (1212bp)
protein (404aa)
Acyl-CoA dehydrogenase domain protein Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WXP1_ALIAD
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_13_Actinobacteria_55_18_curated
PLM1_100_b1_sep16_scaffold_612_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15910..16368)
-----------------
DNA (459bp)
protein (153aa)
cupin Tax=Patulibacter americanus RepID=UPI0003B5C31E
Cupin 2 barrel domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_612_18
unknown

Not on your lists

16409..16912
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_612_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16898..17608)
-----------------
DNA (711bp)
protein (237aa)
HDHD3; haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform 1 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative HAD superfamily hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_612_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17618..18454)
-----------------
DNA (837bp)
protein (279aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F052_CONWI
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADB50028.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 20 items

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